RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 PCLOQ9Y6V0 5065 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 MFAP4P55083 255 aa11.72□□□□□ -0.53
VCX3A-201ENST00000381089 AP3S2P59780 193 aa11.72□□□□□ -0.53
VCX3A-201ENST00000381089 MEF2DQ14814 521 aa11.72□□□□□ -0.53
VCX3A-201ENST00000381089 MOB3AQ96BX8 217 aa11.72□□□□□ -0.53
VCX3A-201ENST00000381089 TXN2Q99757 166 aa11.72□□□□□ -0.53
VCX3A-201ENST00000381089 DNAH6Q9C0G6 4158 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 IGHV3-49A0A0A0MS15 119 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 IGLL5B9A064 214 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 DISC1C4P0D8 188 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 DNASE2O00115 360 aaPredicted RBP11.71□□□□□ -0.53
VCX3A-201ENST00000381089 DFFBO76075 338 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 GNRHRP30968 328 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 LPAR6P43657 344 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 DHRS11Q6UWP2 260 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 GBGT1Q8N5D6 347 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 ARRDC1Q8N5I2 433 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 MISP3Q96FF7 219 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 NSG2Q9Y328 171 aa11.71□□□□□ -0.53
VCX3A-201ENST00000381089 PGAM2P15259 253 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 S100GP29377 79 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 G6PCP35575 357 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 PRR20EP86478 221 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 PRR20CP86479 221 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 PRR20DP86480 221 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 PRR20BP86481 221 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 PRR20AP86496 221 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 TCF24Q7RTU0 167 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 OR51S1Q8NGJ8 323 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 CCDC32Q9BV29 185 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 HRH4Q9H3N8 390 aa11.7□□□□□ -0.54
VCX3A-201ENST00000381089 C15orf61A6NNL5 157 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 DEFB4AO15263 64 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 ST8SIA3O43173 380 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 GNG7O60262 68 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 PGLYRP1O75594 196 aaPredicted RBP11.69□□□□□ -0.54
VCX3A-201ENST00000381089 FAUP35544 74 aaKnown RBP11.69□□□□□ -0.54
VCX3A-201ENST00000381089 RPL11P62913 178 aaKnown RBP11.69□□□□□ -0.54
VCX3A-201ENST00000381089 PHLDA2Q53GA4 152 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 TMEM41BQ5BJD5 291 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 FAM90A2PQ658T7 463 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 LINC00336Q6ZUF6 198 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 STHQ8IWL8 128 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 TMEM231Q9H6L2 316 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 TMEM14BQ9NUH8 114 aa11.69□□□□□ -0.54
VCX3A-201ENST00000381089 KIAA1109Q2LD37 5005 aa11.68□□□□□ -0.54
VCX3A-201ENST00000381089 IGHV3OR16-13A0A075B7E8 117 aa11.68□□□□□ -0.54
VCX3A-201ENST00000381089 IGHV3-74A0A0B4J1X5 117 aa11.68□□□□□ -0.54
VCX3A-201ENST00000381089 TRAV2A0A0B4J234 112 aa11.68□□□□□ -0.54
VCX3A-201ENST00000381089 PI3P19957 117 aa11.68□□□□□ -0.54
VCX3A-201ENST00000381089 LHFPL1Q86WI0 220 aa11.68□□□□□ -0.54
VCX3A-201ENST00000381089 DUSP18Q8NEJ0 188 aa11.68□□□□□ -0.54
VCX3A-201ENST00000381089 PRRT1Q99946 306 aa11.68□□□□□ -0.54
VCX3A-201ENST00000381089 MS4A6AQ9H2W1 248 aa11.68□□□□□ -0.54
VCX3A-201ENST00000381089 APLNQ9ULZ1 77 aa11.68□□□□□ -0.54
VCX3A-201ENST00000381089 I3L2K1 104 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 GPR31O00270 319 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 MT-CO2P00403 227 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 DEFB131AP59861 70 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 LEMD1Q68G75 181 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 ZNF114Q8NC26 417 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 OR13C8Q8NGS7 320 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 OR4A16Q8NH70 328 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 TERB2Q8NHR7 220 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 MARCH1Q8TCQ1 289 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 MRGPRFQ96AM1 343 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 PINX1Q96BK5 328 aaKnown RBP11.67□□□□□ -0.54
VCX3A-201ENST00000381089 SCP2D1Q9UJQ7 156 aa11.67□□□□□ -0.54
VCX3A-201ENST00000381089 UPK1BO75841 260 aa11.66□□□□□ -0.54
VCX3A-201ENST00000381089 MIFP14174 115 aa11.66□□□□□ -0.54
VCX3A-201ENST00000381089 NPBWR1P48145 328 aa11.66□□□□□ -0.54
VCX3A-201ENST00000381089 ERHP84090 104 aaKnown RBP11.66□□□□□ -0.54
VCX3A-201ENST00000381089 ST8SIA2Q92186 375 aa11.66□□□□□ -0.54
VCX3A-201ENST00000381089 VSIRQ9H7M9 311 aa11.66□□□□□ -0.54
VCX3A-201ENST00000381089 FAM212BQ9NTI7 297 aaPredicted RBP11.66□□□□□ -0.54
VCX3A-201ENST00000381089 RABAC1Q9UI14 185 aa11.66□□□□□ -0.54
VCX3A-201ENST00000381089 TRAV10A0A0B4J240 114 aa11.65□□□□□ -0.54
VCX3A-201ENST00000381089 CCR6P51684 374 aa11.65□□□□□ -0.54
VCX3A-201ENST00000381089 LPCAT3Q6P1A2 487 aa11.65□□□□□ -0.54
VCX3A-201ENST00000381089 MORN3Q6PF18 240 aaPredicted RBP11.65□□□□□ -0.54
VCX3A-201ENST00000381089 TOMM20LQ6UXN7 152 aa11.65□□□□□ -0.54
VCX3A-201ENST00000381089 H2BFWTQ7Z2G1 175 aa11.65□□□□□ -0.54
VCX3A-201ENST00000381089 Q8NAQ8 132 aa11.65□□□□□ -0.54
VCX3A-201ENST00000381089 ZNF414Q96IQ9 312 aa11.65□□□□□ -0.54
VCX3A-201ENST00000381089 A0A1W2PS18 150 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 CENPXA8MT69 81 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 PLA2G10O15496 165 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 SCGB2A1O75556 95 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 SPP1P10451 314 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 HLA-DMBP28068 263 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 UCP3P55916 312 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 PRCDQ00LT1 54 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 IFITM3Q01628 133 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 ZNF600Q6ZNG1 722 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 NARS2Q96I59 477 aaKnown RBP11.64□□□□□ -0.55
VCX3A-201ENST00000381089 TBC1D24Q9ULP9 559 aa11.64□□□□□ -0.55
VCX3A-201ENST00000381089 C14orf166Q9Y224 244 aaKnown RBP11.64□□□□□ -0.55
VCX3A-201ENST00000381089 IGHV4-4A0A075B6R2 117 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 IGHV4-28A0A0C4DH34 117 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 NAP1L6A6NFF2 107 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms