RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ZNF439Q8NDP4 499 aa13.21□□□□□ -0.3
NKX3-1-201ENST00000380871 OR2T6Q8NHC8 308 aa13.21□□□□□ -0.3
NKX3-1-201ENST00000380871 C20orf144Q9BQM9 153 aa13.21□□□□□ -0.3
NKX3-1-201ENST00000380871 TEX50A0A1B0GTY4 177 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 E7EUB6 86 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 SRIP30626 198 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 TFPI2P48307 235 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 AMTP48728 403 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 Q0VG73 95 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 GNB1LQ9BYB4 327 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 TRAV9-1A0A075B6T8 112 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 NPSP0C0P6 89 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 ADIPOQQ15848 244 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 LHFPL4Q7Z7J7 247 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 FAM169BQ8N8A8 192 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 TMEM208Q9BTX3 173 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 DYNLRB1Q9NP97 96 aa13.2□□□□□ -0.3
NKX3-1-201ENST00000380871 SAA1P0DJI8 122 aaPredicted RBP13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 NBL1P41271 181 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 PRCDQ00LT1 54 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 TIGITQ495A1 244 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 TECRQ9NZ01 308 aaKnown RBP13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 LY96Q9Y6Y9 160 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 SPTAN1Q13813 2472 aaKnown RBP13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 RELNP78509 3460 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 LYNX1G3V0Z9 82 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 BMPR1BO00238 502 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 LYNX1P0DP58 116 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 CFHR2P36980 270 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 IBA57Q5T440 356 aaKnown RBP13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 SAP30LQ9HAJ7 183 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 NRN1Q9NPD7 142 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 TMEM167BQ9NRX6 74 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 SLC35D1Q9NTN3 355 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 CSMD1Q96PZ7 3565 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 A0A1W2PS18 150 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 DIRC3C9JPN6 131 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 UPK2O00526 184 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 ZNF253O75346 499 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 RPLP1P05386 114 aaKnown RBP13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 PYYP10082 97 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 C1orf174Q8IYL3 243 aa13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 SLC25A10Q9UBX3 287 aaPredicted RBP13.19□□□□□ -0.3
NKX3-1-201ENST00000380871 NCOR2Q9Y618 2525 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 TRAV34A0A0B4J273 112 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 FAM90A27PA6NNH2 459 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 THBDP07204 575 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 TBR1Q16650 682 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 LYPD2Q6UXB3 125 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 ATOH7Q8N100 152 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 BRS3P32247 399 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 STUMQ69YW2 141 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 IGF2BP2-AS1Q96M15 143 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 CDC42EP3Q9UKI2 254 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 PRNDQ9UKY0 176 aa13.18□□□□□ -0.3
NKX3-1-201ENST00000380871 RNASE2P10153 161 aaKnown RBP13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 CHRNB4P30926 498 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 SLAQ13239 276 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 C10orf55Q5SWW7 151 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 LINC01560Q8TB33 94 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 WNT10AQ9GZT5 417 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 PLAUP00749 431 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 SGK494Q96LW2 274 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 CHD8Q9HCK8 2581 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 ZZEF1O43149 2961 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 BSNQ9UPA5 3926 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 C17orf100A8MU93 164 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 OR5G3P0C626 314 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 UBE2L3P68036 154 aaKnown RBP13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 SLC25A33Q9BSK2 321 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 SLC25A2Q9BXI2 301 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 ZNF586Q9NXT0 402 aa13.17□□□□□ -0.3
NKX3-1-201ENST00000380871 NTF3P20783 257 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 MAJINQ3KP22 176 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 KCNS1Q96KK3 526 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 FAM167A-AS1Q96KT0 104 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 MRPL20Q9BYC9 149 aaKnown RBP13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 LPAR2Q9HBW0 351 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 TNFRSF1AP19438 455 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 ZNF788Q6ZQV5 615 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 CORO2AQ92828 525 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 TMEM68Q96MH6 324 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 OSTCQ9NRP0 149 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 ZNF355PQ9NSJ1 428 aa13.16□□□□□ -0.3
NKX3-1-201ENST00000380871 DIAPH2-AS1Q14236 149 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 POU2AF1Q16633 256 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 TRBV9A0A0B4J1U6 114 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 IGHV3-72A0A0B4J1Y9 119 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 ISLRO14498 428 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 PPOXP50336 477 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 LCN12Q6JVE5 192 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 PRR27Q6MZM9 219 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 MALRD1Q5VYJ5 2156 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 NKX6-3A6NJ46 265 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 AMY1AP04745 511 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 C8orf88P0DMB2 117 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 MMDQ15546 238 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 RTL8BQ17RB0 113 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 SPATA45Q537H7 98 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms