RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ZNF430Q9H8G1 570 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 FKBP11Q9NYL4 201 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 SPTBN1Q01082 2364 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 SCO2A0A1W2PP80 73 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 PHOX2AO14813 284 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 PDE6DO43924 150 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 IGHV3-48P01763 117 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 GCHFRP30047 84 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 OR10J1P30954 320 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 NUTF2P61970 127 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 SSBP2P81877 361 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 FAM78BQ5VT40 261 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 TMEM144Q7Z5S9 345 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 TGIF2LXQ8IUE1 241 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 OR4P4Q8NGL7 312 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 C22orf15Q8WYQ4 148 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 KCNIP2Q9NS61 270 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 TRGC1P0CF51 173 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 HOXA5P20719 270 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 ZNF137PP52743 207 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 RHOBP62745 196 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 RAB31Q13636 194 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 FBXL19-AS1Q494R0 122 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 GFI1BQ5VTD9 330 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 SMIM15Q7Z3B0 74 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 LINC01551Q86U37 167 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 PDPNQ86YL7 162 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 C8orf31Q8N9H6 132 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 OR1L8Q8NGR8 309 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 TMEM167AQ8TBQ9 72 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 TMEM133Q9H2Q1 129 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 WASHC3Q9Y3C0 194 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 FNDC10F2Z333 226 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 H7BYZ3 331 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 ENSAO43768 121 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 C1QTNF9P0C862 333 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 USF1P22415 310 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 CNTFRP26992 372 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 GALR1P47211 349 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 CD69Q07108 199 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 KLRB1Q12918 225 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 ZNF672Q499Z4 452 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 LHFPL4Q7Z7J7 247 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 CCDC140Q96MF4 163 aa6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 FNDC4Q9H6D8 234 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 RALYQ9UKM9 306 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-204ENST00000380176 TMEM238C9JI98 176 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 REG1AP05451 166 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 PPOXP50336 477 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 RBX1P62877 108 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 RUSC1-AS1Q66K80 236 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 ST6GALNAC3Q8NDV1 305 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 ZNF503Q96F45 646 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 ACY3Q96HD9 319 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 C1orf43Q9BWL3 253 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 HIVEP3Q5T1R4 2406 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 ABCA1O95477 2261 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 IGHV2-26A0A0B4J1V2 119 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 VENTXO95231 258 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 APELAP0DMC3 54 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 MORN5Q5VZ52 161 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 FAM71F2Q6NXP2 309 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 C19orf35Q6ZS72 473 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 TMEM37Q8WXS4 190 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 PERPQ96FX8 193 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 PYGO2Q9BRQ0 406 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 PCGF1Q9BSM1 259 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 MRPL36Q9P0J6 103 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 A0A1W2PPQ1 181 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 M0QZK8 103 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 IGLV1-47P01700 117 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 CRYGCP07315 174 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 SOD3P08294 240 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 UCNP55089 124 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 FAM3BP58499 235 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 ERHP84090 104 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 PDZD11Q5EBL8 140 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 NUDT10Q8NFP7 164 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 FUT9Q9Y231 359 aa6.41□□□□□ -1.38
PDLIM5-204ENST00000380176 ZFHX3Q15911 3703 aa6.4□□□□□ -1.38
PDLIM5-204ENST00000380176 ITPR1Q14643 2758 aa6.4□□□□□ -1.38
PDLIM5-204ENST00000380176 A0A1W2PPI3 338 aa6.4□□□□□ -1.38
PDLIM5-204ENST00000380176 F6UZH7 168 aa6.4□□□□□ -1.38
PDLIM5-204ENST00000380176 CDX1P47902 265 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-204ENST00000380176 PSG5Q15238 335 aa6.4□□□□□ -1.38
PDLIM5-204ENST00000380176 OR4X1Q8NH49 305 aa6.4□□□□□ -1.38
PDLIM5-204ENST00000380176 OCC1Q8TAD7 63 aa6.4□□□□□ -1.38
PDLIM5-204ENST00000380176 C22orf46C9J442 243 aa6.4□□□□□ -1.39
PDLIM5-204ENST00000380176 OR10J4P0C629 311 aa6.4□□□□□ -1.39
PDLIM5-204ENST00000380176 COX7A1P24310 79 aa6.4□□□□□ -1.39
PDLIM5-204ENST00000380176 PRSS8Q16651 343 aa6.4□□□□□ -1.39
PDLIM5-204ENST00000380176 HLA-DRB5Q30154 266 aa6.4□□□□□ -1.39
PDLIM5-204ENST00000380176 PRSS57Q6UWY2 283 aa6.4□□□□□ -1.39
PDLIM5-204ENST00000380176 VSTM2AQ8TAG5 236 aa6.4□□□□□ -1.39
PDLIM5-204ENST00000380176 IGFBPL1Q8WX77 278 aa6.4□□□□□ -1.39
PDLIM5-204ENST00000380176 OR5B12Q96R08 314 aa6.4□□□□□ -1.39
PDLIM5-204ENST00000380176 SRD5A3Q9H8P0 318 aa6.4□□□□□ -1.39
PDLIM5-204ENST00000380176 TRAV5A0A0B4J249 113 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 PPIAL4CA0A0B4J2A2 164 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 PSMB11A5LHX3 300 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms