RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 CLEC7AQ9BXN2 247 aa12.19□□□□□ -0.46
PRDM16-203ENST00000378391 FREM3P0C091 2139 aa12.19□□□□□ -0.46
PRDM16-203ENST00000378391 SCO2A0A1W2PP80 73 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 PRR19A6NJB7 356 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 HOXA3O43365 443 aaPredicted RBP12.18□□□□□ -0.46
PRDM16-203ENST00000378391 REG1AP05451 166 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 CCL1P22362 96 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 GLRXP35754 106 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 TDGF1P3P51864 188 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 HEPN1Q6WQI6 88 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 CACNG8Q8WXS5 425 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 EAF1Q96JC9 268 aaPredicted RBP12.18□□□□□ -0.46
PRDM16-203ENST00000378391 CEP250Q9BV73 2442 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 ATP5G3P48201 142 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 IMMP2LQ96T52 175 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 RFPL3SP0C7P2 107 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 QRFPP83859 136 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 RNF144BQ7Z419 303 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 LHFPL1Q86WI0 220 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 VWCEQ96DN2 955 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 TSSC4Q9Y5U2 329 aaPredicted RBP12.18□□□□□ -0.46
PRDM16-203ENST00000378391 LYL1P12980 280 aa12.18□□□□□ -0.46
PRDM16-203ENST00000378391 DENND4CQ5VZ89 1909 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 TRAV9-2A0A087WT02 112 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 IGFBP2P18065 325 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 ID3Q02535 119 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 LRTM2Q8N967 370 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 ESPL1Q14674 2120 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 COL4A3Q01955 1670 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 IGKV1D-8A0A087WSZ0 117 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 IGKV1-9A0A0C4DH69 117 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 CGB1A6NKQ9 187 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 PEX7O00628 323 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 TNFSF13O75888 250 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 SPANXDQ9BXN6 97 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 PSMB11A5LHX3 300 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 NPIPB11E5RHQ5 1161 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 CLPSP04118 112 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 BMPERQ8N8U9 685 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 SELENOKQ9Y6D0 94 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 TM4SF5O14894 197 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 IGHV3-48P01763 117 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 PRR7Q8TB68 274 aa12.17□□□□□ -0.46
PRDM16-203ENST00000378391 ZNF703Q9H7S9 590 aaPredicted RBP12.17□□□□□ -0.46
PRDM16-203ENST00000378391 A0A1B0GUT8 65 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 ZNF319Q9P2F9 582 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 MOSP00540 346 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 AZU1P20160 251 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 ADAMTSL5Q6ZMM2 481 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 EPDR1Q9UM22 224 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 TRBV20-1A0A075B6N2 111 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 PPP1R17O96001 155 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 CSRP1P21291 193 aaKnown RBP12.16□□□□□ -0.46
PRDM16-203ENST00000378391 TMEM106BQ9NUM4 274 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 CCL20P78556 96 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 PAPPA-AS1Q5QFB9 102 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 SRSF8Q9BRL6 282 aaKnown RBP12.16□□□□□ -0.46
PRDM16-203ENST00000378391 COL4A6Q14031 1691 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 TRBV20OR9-2A0A075B6H5 130 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST1H2BKO60814 126 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 FCN3O75636 299 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST1H2BJP06899 126 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST1H2BOP23527 126 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST1H2BBP33778 126 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 UCNP55089 124 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST1H2BDP58876 126 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST1H2BCP62807 126 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST2H2BEQ16778 126 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST1H2BHQ93079 126 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 RNF166Q96A37 237 aaPredicted RBP12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST1H2BNQ99877 126 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 HIST1H2BMQ99879 126 aa12.16□□□□□ -0.46
PRDM16-203ENST00000378391 OR13A1Q8NGR1 328 aa12.15□□□□□ -0.46
PRDM16-203ENST00000378391 KIR2DL4Q99706 377 aa12.15□□□□□ -0.46
PRDM16-203ENST00000378391 NAA38Q9BRA0 125 aaKnown RBP12.15□□□□□ -0.46
PRDM16-203ENST00000378391 ATXN8Q156A1 80 aa12.15□□□□□ -0.46
PRDM16-203ENST00000378391 PEAR1Q5VY43 1037 aaPredicted RBP12.15□□□□□ -0.46
PRDM16-203ENST00000378391 Q6AWC8 147 aa12.15□□□□□ -0.46
PRDM16-203ENST00000378391 FBXL15Q9H469 300 aa12.15□□□□□ -0.46
PRDM16-203ENST00000378391 NPSP0C0P6 89 aa12.15□□□□□ -0.46
PRDM16-203ENST00000378391 LINC00271P0C7V0 271 aa12.15□□□□□ -0.46
PRDM16-203ENST00000378391 NPPCP23582 126 aa12.15□□□□□ -0.46
PRDM16-203ENST00000378391 GPR82Q96P67 336 aa12.15□□□□□ -0.46
PRDM16-203ENST00000378391 IZUMO1RA6ND01 250 aa12.15□□□□□ -0.47
PRDM16-203ENST00000378391 RAMP3O60896 148 aa12.15□□□□□ -0.47
PRDM16-203ENST00000378391 C5orf47Q569G3 176 aa12.15□□□□□ -0.47
PRDM16-203ENST00000378391 TMEM8BA6NDV4 472 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 J3KT08 172 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 RBM3P98179 157 aaKnown RBP12.14□□□□□ -0.47
PRDM16-203ENST00000378391 C1orf194Q5T5A4 169 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 IGLV3-19P01714 112 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 DLX6P56179 175 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 FAM90A1Q86YD7 464 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 C1QL4Q86Z23 238 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 C1orf162Q8NEQ5 155 aaPredicted RBP12.14□□□□□ -0.47
PRDM16-203ENST00000378391 ZNF837Q96EG3 531 aaPredicted RBP12.14□□□□□ -0.47
PRDM16-203ENST00000378391 SDK2Q58EX2 2172 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 CDKN1BP46527 198 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 HERV-K104P63124 156 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms