RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 FAM106AQ4KMX7 169 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 PGLYRP4Q96LB8 373 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 CHAC1Q9BUX1 264 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 TMEM74BQ9NUR3 256 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 IGKV1D-8A0A087WSZ0 117 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 TRAV2A0A0B4J234 112 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 RPL7P18124 248 aaKnown RBP9.82□□□□□ -0.84
NPHP4-202ENST00000378161 CA6P23280 308 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 UBE2L3P68036 154 aaKnown RBP9.82□□□□□ -0.84
NPHP4-202ENST00000378161 SPINK9Q5DT21 86 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 SPEM1Q8N4L4 309 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 ABHD17AQ96GS6 310 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 CEP350Q5VT06 3117 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 TFF3Q07654 80 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.82□□□□□ -0.84
NPHP4-202ENST00000378161 SLC22A18ASQ8N1D0 253 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 PGLYRP1O75594 196 aaPredicted RBP9.82□□□□□ -0.84
NPHP4-202ENST00000378161 GRPP07492 148 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 HSPE1P61604 102 aaKnown RBP9.82□□□□□ -0.84
NPHP4-202ENST00000378161 GCSAMQ8N6F7 178 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 CNEP1R1Q8N9A8 125 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 PPDPFQ9H3Y8 114 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 MTCL1Q9Y4B5 1905 aaKnown RBP9.82□□□□□ -0.84
NPHP4-202ENST00000378161 CCDC179H3BU77 68 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 K7ERJ3 54 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 TFF2Q03403 129 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 VWC2Q2TAL6 325 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 MIC13Q5XKP0 118 aa9.82□□□□□ -0.84
NPHP4-202ENST00000378161 MED12Q93074 2177 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 RIF1Q5UIP0 2472 aaKnown RBP9.81□□□□□ -0.84
NPHP4-202ENST00000378161 NPIPB13A6NJU9 1138 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 HIGD1CA8MV81 97 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 NPIPB4C9JG80 1138 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 TIMM8AO60220 97 aaPredicted RBP9.81□□□□□ -0.84
NPHP4-202ENST00000378161 ZXDAP98168 799 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 ZNF818PQ6ZRF7 136 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 OR5AS1Q8N127 324 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 TP73-AS1Q9UF72 201 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 EPDR1Q9UM22 224 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 RNF114Q9Y508 228 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 MS4A18H0YCH9 400 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 COL8A1P27658 744 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 PAX9P55771 341 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 MS4A18Q3C1V0 323 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 ZNF645Q8N7E2 425 aa9.81□□□□□ -0.84
NPHP4-202ENST00000378161 C9JAW5 83 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 IL11P20809 199 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 TWIST1Q15672 202 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 DNAJC30Q96LL9 226 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 EDA2RQ9HAV5 297 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 HIGD1AQ9Y241 93 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 IGHMP01871 453 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 TMEM155Q4W5P6 130 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 SPACA3Q8IXA5 215 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 ASIPP42127 132 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 Q8N976 141 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 TMEM54Q969K7 222 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 AAMDCQ9H7C9 122 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 FZR1Q9UM11 496 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 SNRNP200O75643 2136 aaKnown RBP9.8□□□□□ -0.84
NPHP4-202ENST00000378161 CEP250Q9BV73 2442 aa9.8□□□□□ -0.84
NPHP4-202ENST00000378161 IGKV3-11P04433 115 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 IL11RAQ14626 422 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 Q96M66 194 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 NABP2Q9BQ15 211 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 ANAPC10Q9UM13 185 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 LSM4Q9Y4Z0 139 aaKnown RBP9.79□□□□□ -0.84
NPHP4-202ENST00000378161 NMSQ5H8A3 153 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 ATP5L2Q7Z4Y8 100 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 TMEM101Q96IK0 257 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 DECR2Q9NUI1 292 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 OR2H2O95918 312 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 QRFPP83859 136 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 SRSF1Q07955 248 aaKnown RBP eCLIP9.79□□□□□ -0.84
NPHP4-202ENST00000378161 Q8IYB0 196 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 GLMPQ8WWB7 406 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 TMUB1Q9BVT8 246 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 TM2D1Q9BX74 207 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 SP1P08047 785 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 PATE4P0C8F1 98 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 HERVK_113P61574 105 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 GUSBP11Q6P575 273 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 LHFPL6Q9Y693 200 aa9.79□□□□□ -0.84
NPHP4-202ENST00000378161 PIGYQ3MUY2 71 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 PPP1R32Q7Z5V6 425 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 ZDHHC16Q969W1 377 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 NLRC5Q86WI3 1866 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 IGHV1-24A0A0C4DH33 117 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 IGLL5B9A064 214 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 EDDM3AQ14507 147 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 PMVKQ15126 192 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 SLC25A47Q6Q0C1 308 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 RBPMS2Q6ZRY4 209 aaKnown RBP9.78□□□□□ -0.84
NPHP4-202ENST00000378161 MRAPQ8TCY5 172 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 ASCL2Q99929 193 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 HEATR1Q9H583 2144 aaKnown RBP9.78□□□□□ -0.84
NPHP4-202ENST00000378161 TGFBR3LH3BV60 316 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 DEFA4P12838 97 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms