RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TMEM170AQ8WVE7 144 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 C2orf50Q96LR7 162 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 MAGT1Q9H0U3 335 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 SIGLEC8Q9NYZ4 499 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 GSKIPQ9P0R6 139 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 C5orf51A6NDU8 294 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 NUPL2O15504 423 aaKnown RBP10.12□□□□□ -0.79
CKAP2-202ENST00000378034 GNG7O60262 68 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 SCGB2A1O75556 95 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 CTSGP08311 255 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 IAPPP10997 89 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 SPNP16150 400 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 RAB11AP62491 216 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 EGFEM1PQ0D2K5 195 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 OR4X1Q8NH49 305 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 OR4C12Q96R67 309 aa10.12□□□□□ -0.79
CKAP2-202ENST00000378034 ZNF436Q9C0F3 470 aaPredicted RBP10.12□□□□□ -0.79
CKAP2-202ENST00000378034 FNDC4Q9H6D8 234 aaPredicted RBP10.12□□□□□ -0.79
CKAP2-202ENST00000378034 FAM25EA8MYX2 175 aa10.11□□□□□ -0.79
CKAP2-202ENST00000378034 CCSO14618 274 aa10.11□□□□□ -0.79
CKAP2-202ENST00000378034 SAP30O75446 220 aa10.11□□□□□ -0.79
CKAP2-202ENST00000378034 POLR2GP62487 172 aaKnown RBP eCLIP10.11□□□□□ -0.79
CKAP2-202ENST00000378034 RELQ04864 619 aaPredicted RBP10.11□□□□□ -0.79
CKAP2-202ENST00000378034 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
CKAP2-202ENST00000378034 RAB40CQ96S21 281 aa10.11□□□□□ -0.79
CKAP2-202ENST00000378034 NOTCH3Q9UM47 2321 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 TRAV30A0A087WSZ9 112 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 A8MWP6 167 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 NDUFA4O00483 81 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 CLN5O75503 358 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 IFNA4P05014 189 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 ADMP35318 185 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 GPX4P36969 197 aaPredicted RBP10.1□□□□□ -0.79
CKAP2-202ENST00000378034 TAS2R30P59541 319 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 C11orf87Q6NUJ2 197 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 Q6ZNX1 250 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 TMEM116Q8NCL8 245 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 CHRDL1Q9BU40 450 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 ZC4H2Q9NQZ6 224 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 C7orf66A4D0T2 115 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 C15orf62A8K5M9 175 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 TMEM50AO95807 157 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 SCGB1D2O95969 90 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 IGHV3-48P01763 117 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 ELLP55199 621 aaPredicted RBP10.1□□□□□ -0.79
CKAP2-202ENST00000378034 CD69Q07108 199 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 RGS21Q2M5E4 152 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 IL34Q6ZMJ4 242 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 CACNG8Q8WXS5 425 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 UFC1Q9Y3C8 167 aa10.1□□□□□ -0.79
CKAP2-202ENST00000378034 STRAPQ9Y3F4 350 aaKnown RBP10.1□□□□□ -0.79
CKAP2-202ENST00000378034 SSSCA1O60232 199 aa10.09□□□□□ -0.79
CKAP2-202ENST00000378034 MBPP02686 304 aaPredicted RBP10.09□□□□□ -0.79
CKAP2-202ENST00000378034 CSN3P07498 182 aa10.09□□□□□ -0.79
CKAP2-202ENST00000378034 MLANAQ16655 118 aa10.09□□□□□ -0.79
CKAP2-202ENST00000378034 PRSS54Q6PEW0 395 aa10.09□□□□□ -0.79
CKAP2-202ENST00000378034 PSENENQ9NZ42 101 aa10.09□□□□□ -0.79
CKAP2-202ENST00000378034 ZNF320A2RRD8 509 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 SSNA1O43805 119 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 IL15RAQ13261 267 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 SPANXN5Q5MJ07 72 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 SLC16A13Q7RTY0 426 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 TMEM190Q8WZ59 177 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 MARC2Q969Z3 335 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 PPP1R14BQ96C90 147 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 RCL1Q9Y2P8 373 aaKnown RBP10.08□□□□□ -0.8
CKAP2-202ENST00000378034 C2orf70A6NJV1 201 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 GOSR2O14653 212 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 TSC22D2O75157 780 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 CYCSP99999 105 aaKnown RBP10.08□□□□□ -0.8
CKAP2-202ENST00000378034 OR1S2Q8NGQ3 325 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 MRPL36Q9P0J6 103 aaKnown RBP10.08□□□□□ -0.8
CKAP2-202ENST00000378034 NOTCH1P46531 2555 aa10.08□□□□□ -0.8
CKAP2-202ENST00000378034 hCG_2014768A0A024R1R8 64 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 K7EMT4 169 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 PFDN1O60925 122 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 IGLV1-51P01701 117 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 RND2P52198 227 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 PAX9P55771 341 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 UNQ9165/PRO28630Q6UXU0 137 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 ZNF600Q6ZNG1 722 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 OR2K2Q8NGT1 345 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 SLC35E1Q96K37 410 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 NMES1Q9C002 83 aa10.07□□□□□ -0.8
CKAP2-202ENST00000378034 PAIP2BQ9ULR5 123 aaKnown RBP10.07□□□□□ -0.8
CKAP2-202ENST00000378034 IGHV3-35A0A0C4DH35 117 aa10.06□□□□□ -0.8
CKAP2-202ENST00000378034 K7EPK0 472 aa10.06□□□□□ -0.8
CKAP2-202ENST00000378034 L7N2F9 121 aa10.06□□□□□ -0.8
CKAP2-202ENST00000378034 FOLR2P14207 255 aa10.06□□□□□ -0.8
CKAP2-202ENST00000378034 PVALBP20472 110 aaPredicted RBP10.06□□□□□ -0.8
CKAP2-202ENST00000378034 KRTAP10-11P60412 298 aa10.06□□□□□ -0.8
CKAP2-202ENST00000378034 VAMP2P63027 116 aa10.06□□□□□ -0.8
CKAP2-202ENST00000378034 DAZ1Q9NQZ3 744 aaKnown RBP10.06□□□□□ -0.8
CKAP2-202ENST00000378034 TECRQ9NZ01 308 aaKnown RBP10.06□□□□□ -0.8
CKAP2-202ENST00000378034 MRPL27Q9P0M9 148 aaKnown RBP10.06□□□□□ -0.8
CKAP2-202ENST00000378034 ALG5Q9Y673 324 aa10.06□□□□□ -0.8
CKAP2-202ENST00000378034 TMEM213A2RRL7 107 aa10.06□□□□□ -0.8
CKAP2-202ENST00000378034 PRSS46E5RG02 174 aa10.06□□□□□ -0.8
CKAP2-202ENST00000378034 H3BP45 60 aa10.06□□□□□ -0.8
CKAP2-202ENST00000378034 SCAF4O95104 1147 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms