RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 IL19Q9UHD0 177 aa10.57□□□□□ -0.72
MSH5-204ENST00000375755 WASHC3Q9Y3C0 194 aa10.57□□□□□ -0.72
MSH5-204ENST00000375755 ATRXP46100 2492 aa10.57□□□□□ -0.72
MSH5-204ENST00000375755 TRAV3A0A0B4J244 114 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 IGHV1-18A0A0C4DH31 117 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 HAND1O96004 215 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 CA7P43166 264 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 RPS20P60866 119 aaKnown RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 RNASEKQ6P5S7 137 aaKnown RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 RTL8AQ9BWD3 113 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 TNFRSF19Q9NS68 423 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 HCFC1P51610 2035 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 TET2Q6N021 2002 aaPredicted RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 FCGR3BO75015 233 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 MSMPQ1L6U9 139 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 INO80CQ6PI98 192 aaPredicted RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 Q8IYB0 196 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 NHLRC2Q8NBF2 726 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 OR4A16Q8NH70 328 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 RFESDQ8TAC1 157 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 ROS1P08922 2347 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 MBD3L4A6NDZ8 208 aaPredicted RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 MBD3L3A6NE82 208 aaPredicted RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 MBD3L5A6NJ08 208 aaPredicted RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 NUDT3O95989 172 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 GPR6P46095 362 aaPredicted RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 RPL8P62917 257 aaKnown RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 BVES-AS1Q5T3Y7 98 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 MBD3L2Q8NHZ7 208 aaPredicted RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 CLUHP3Q96NS8 147 aa10.56□□□□□ -0.72
MSH5-204ENST00000375755 HSD17B10Q99714 261 aaKnown RBP10.56□□□□□ -0.72
MSH5-204ENST00000375755 OOEPA6NGQ2 149 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 GGTLC3B5MD39 225 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 WNT9BO14905 357 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 HOXC12P31275 282 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 TEPPQ6URK8 271 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 TMEM108Q6UXF1 575 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 Q6ZR03 302 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 BHLHA15Q7RTS1 189 aaPredicted RBP10.55□□□□□ -0.72
MSH5-204ENST00000375755 TPRX1Q8N7U7 411 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 Q8NA96 180 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 ZNF503Q96F45 646 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 COQ2Q96H96 371 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 POLDIP2Q9Y2S7 368 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 DCHS2Q6V1P9 2916 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 MUC21A0A0G2JKD1 596 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 MUC21A0A140T8X8 626 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 PROP1O75360 226 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 IGFBP2P18065 325 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 NPY1RP25929 384 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 PRR31Q5SQ13 230 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 MUC21Q5SSG8 566 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 IGF2BP2-AS1Q96M15 143 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 FAM234AQ9H0X4 552 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 PLCE1Q9P212 2302 aa10.55□□□□□ -0.72
MSH5-204ENST00000375755 SH2D7A6NKC9 451 aaPredicted RBP10.54□□□□□ -0.72
MSH5-204ENST00000375755 GATA2P23769 480 aaPredicted RBP10.54□□□□□ -0.72
MSH5-204ENST00000375755 CORO2AQ92828 525 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 PLPPR2Q96GM1 343 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 GCM1Q9NP62 436 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 hDV102S1A0JD36 115 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 OR4C46A6NHA9 309 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 CIDEAO60543 219 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 MFAP2P55001 183 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 PRR20EP86478 221 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 PRR20CP86479 221 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 PRR20DP86480 221 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 PRR20BP86481 221 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 PRR20AP86496 221 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 FAM27E3Q08E93 113 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 KLF5Q13887 457 aaPredicted RBP10.54□□□□□ -0.72
MSH5-204ENST00000375755 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 FAM216AQ8WUB2 273 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 SSBP4Q9BWG4 385 aaPredicted RBP10.54□□□□□ -0.72
MSH5-204ENST00000375755 OBP2BQ9NPH6 170 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 FAM87AP0C7U9 286 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 PPOXP50336 477 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 MRPL49Q13405 166 aaKnown RBP10.54□□□□□ -0.72
MSH5-204ENST00000375755 LTC4SQ16873 150 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 SPRNQ5BIV9 151 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 SLC35E4Q6ICL7 350 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 URB1-AS1Q96HZ7 61 aa10.54□□□□□ -0.72
MSH5-204ENST00000375755 NCOR2Q9Y618 2525 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 NBASA2RRP1 2371 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 DUTP33316 252 aaKnown RBP10.53□□□□□ -0.72
MSH5-204ENST00000375755 OR13A1Q8NGR1 328 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 WIPF2Q8TF74 440 aaPredicted RBP10.53□□□□□ -0.72
MSH5-204ENST00000375755 TMEM70Q9BUB7 260 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 TMEM167BQ9NRX6 74 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 SLC25A10Q9UBX3 287 aaPredicted RBP10.53□□□□□ -0.72
MSH5-204ENST00000375755 TCF19Q9Y242 345 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 FAM120AOSQ5T036 256 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 PRR27Q6MZM9 219 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 LINC00173Q6ZV60 143 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 DCTN5Q9BTE1 182 aa10.53□□□□□ -0.72
MSH5-204ENST00000375755 ZNF430Q9H8G1 570 aaPredicted RBP10.53□□□□□ -0.72
MSH5-204ENST00000375755 SAP30LQ9HAJ7 183 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms