RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 GUSBP1Q15486 140 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 MBNL2Q5VZF2 373 aaKnown RBP11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 Q6ZVH6 145 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 ZNF439Q8NDP4 499 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 CORO2AQ92828 525 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 DNAJC4Q9NNZ3 241 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 ZFP30Q9Y2G7 519 aa11.5□□□□□ -0.57
CLCNKA-202ENST00000375692 RELNP78509 3460 aa11.49□□□□□ -0.57
CLCNKA-202ENST00000375692 SPRY3O43610 288 aa11.49□□□□□ -0.57
CLCNKA-202ENST00000375692 MMP23AO75900 390 aa11.49□□□□□ -0.57
CLCNKA-202ENST00000375692 RPL19P84098 196 aaKnown RBP11.49□□□□□ -0.57
CLCNKA-202ENST00000375692 RELQ04864 619 aaPredicted RBP11.49□□□□□ -0.57
CLCNKA-202ENST00000375692 VHLLQ6RSH7 139 aa11.49□□□□□ -0.57
CLCNKA-202ENST00000375692 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
CLCNKA-202ENST00000375692 UQCR10Q9UDW1 63 aa11.49□□□□□ -0.57
CLCNKA-202ENST00000375692 CACNA1AO00555 2505 aa11.49□□□□□ -0.57
CLCNKA-202ENST00000375692 SLC35D1Q9NTN3 355 aa11.49□□□□□ -0.57
CLCNKA-202ENST00000375692 TEX50A0A1B0GTY4 177 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 IGLV1-44P01699 117 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 HLA-DQA1P01909 254 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 HNRNPA3P51991 378 aaKnown RBP11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 GDF5OSQ5U4N7 250 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 OR2T6Q8NHC8 308 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 SLC25A33Q9BSK2 321 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 CLEC7AQ9BXN2 247 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 ZNF355PQ9NSJ1 428 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 PPP1R14DQ9NXH3 145 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 LAMTOR2Q9Y2Q5 125 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 IGHV3-48P01763 117 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 CRYABP02511 175 aaKnown RBP11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 GPR6P46095 362 aaPredicted RBP11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 PRCDQ00LT1 54 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 TNXAQ16473 311 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 C18orf32Q8TCD1 76 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 SNRNP40Q96DI7 357 aaKnown RBP11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 ZNF331Q9NQX6 463 aaPredicted RBP11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 ARL2-SNX15V9GYD0 113 aa11.48□□□□□ -0.57
CLCNKA-202ENST00000375692 IZUMO1RA6ND01 250 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 UPK2O00526 184 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 C8orf88P0DMB2 117 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 PYYP10082 97 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 SSBP2P81877 361 aaPredicted RBP11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 RND1Q92730 232 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 BORCS7Q96B45 105 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 TUBG2Q9NRH3 451 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 PRNDQ9UKY0 176 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 CT45A6P0DMU7 189 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 MFAP2P55001 183 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 TAS2R45P59539 299 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 ITLN1Q8WWA0 313 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 FAM167A-AS1Q96KT0 104 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 SSBP4Q9BWG4 385 aaPredicted RBP11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 NBASA2RRP1 2371 aa11.47□□□□□ -0.57
CLCNKA-202ENST00000375692 A0A1W2PRE2 83 aa11.46□□□□□ -0.57
CLCNKA-202ENST00000375692 HINT1P49773 126 aaPredicted RBP11.46□□□□□ -0.57
CLCNKA-202ENST00000375692 UBE2L3P68036 154 aaKnown RBP11.46□□□□□ -0.57
CLCNKA-202ENST00000375692 SLC25A2Q9BXI2 301 aa11.46□□□□□ -0.57
CLCNKA-202ENST00000375692 DKK4Q9UBT3 224 aa11.46□□□□□ -0.57
CLCNKA-202ENST00000375692 PLCE1Q9P212 2302 aa11.46□□□□□ -0.58
CLCNKA-202ENST00000375692 DSCAML1Q8TD84 2053 aa11.46□□□□□ -0.58
CLCNKA-202ENST00000375692 FNDC10F2Z333 226 aa11.46□□□□□ -0.58
CLCNKA-202ENST00000375692 RNASE2P10153 161 aaKnown RBP11.46□□□□□ -0.58
CLCNKA-202ENST00000375692 MZT1Q08AG7 82 aa11.46□□□□□ -0.58
CLCNKA-202ENST00000375692 PRR27Q6MZM9 219 aa11.46□□□□□ -0.58
CLCNKA-202ENST00000375692 RPRMLQ8N4K4 120 aa11.46□□□□□ -0.58
CLCNKA-202ENST00000375692 Q8NA96 180 aa11.46□□□□□ -0.58
CLCNKA-202ENST00000375692 A0A1W2PN81 502 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 RPL8P62917 257 aaKnown RBP11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 COX19Q49B96 90 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 C1orf162Q8NEQ5 155 aaPredicted RBP11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 SGK494Q96LW2 274 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 E7EUB6 86 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 LHBP01229 141 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 SAA1P0DJI8 122 aaPredicted RBP11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 CAMPP49913 170 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 PRR30Q53SZ7 412 aaPredicted RBP11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 Q56UQ5 140 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 STUMQ69YW2 141 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 EBLN2Q6P2I7 272 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 NUP35Q8NFH5 326 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 CCL13Q99616 98 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 CBY1Q9Y3M2 126 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 AMMECR1Q9Y4X0 333 aaPredicted RBP11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 NAV3Q8IVL0 2385 aa11.45□□□□□ -0.58
CLCNKA-202ENST00000375692 ZGRF1Q86YA3 2104 aa11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 CORTO00230 105 aa11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 CFHR2P36980 270 aa11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 SELENOVP59797 346 aa11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 CD69Q07108 199 aa11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 POU2AF1Q16633 256 aa11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 C2orf83Q53S99 150 aa11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 C19orf35Q6ZS72 473 aa11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 BHLHA15Q7RTS1 189 aaPredicted RBP11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 NUDT10Q8NFP7 164 aa11.44□□□□□ -0.58
CLCNKA-202ENST00000375692 SARAFQ96BY9 339 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms