RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 GAGE10A6NGK3 116 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 C15orf61A6NNL5 157 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 C15orf62A8K5M9 175 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 DIRC3C9JPN6 131 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 G3V4G9 280 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 CCL21O00585 134 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 ICAM4Q14773 271 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 C8orf31Q8N9H6 132 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 CACNG8Q8WXS5 425 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 P2RX4Q99571 388 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 PRNDQ9UKY0 176 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 FOXA2Q9Y261 457 aaPredicted RBP6.72□□□□□ -1.33
UBR4-202ENST00000375224 OR51B2Q9Y5P1 312 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 CTXND1A0A1B0GTU2 59 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.72□□□□□ -1.33
UBR4-202ENST00000375224 TNFRSF13BO14836 293 aaPredicted RBP6.72□□□□□ -1.33
UBR4-202ENST00000375224 APOA2P02652 100 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 HSPE1P61604 102 aaKnown RBP6.72□□□□□ -1.33
UBR4-202ENST00000375224 FAM71F2Q6NXP2 309 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 KCNIP4Q6PIL6 250 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 ZCCHC24Q8N2G6 241 aaKnown RBP6.72□□□□□ -1.33
UBR4-202ENST00000375224 GEMIN7Q9H840 131 aaKnown RBP6.72□□□□□ -1.33
UBR4-202ENST00000375224 NAT8Q9UHE5 227 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 TCF19Q9Y242 345 aa6.72□□□□□ -1.33
UBR4-202ENST00000375224 BCL2P10415 239 aa6.71□□□□□ -1.33
UBR4-202ENST00000375224 VDAC2P45880 294 aaPredicted RBP6.71□□□□□ -1.33
UBR4-202ENST00000375224 ATP5IP56385 69 aaPredicted RBP6.71□□□□□ -1.33
UBR4-202ENST00000375224 PRSS8Q16651 343 aa6.71□□□□□ -1.33
UBR4-202ENST00000375224 LCN15Q6UWW0 184 aa6.71□□□□□ -1.33
UBR4-202ENST00000375224 BOD1L2Q8IYS8 172 aa6.71□□□□□ -1.33
UBR4-202ENST00000375224 SIGLECL1Q8N7X8 197 aa6.71□□□□□ -1.33
UBR4-202ENST00000375224 DERL1Q9BUN8 251 aa6.71□□□□□ -1.33
UBR4-202ENST00000375224 KCNIP2Q9NS61 270 aa6.71□□□□□ -1.33
UBR4-202ENST00000375224 GNG13Q9P2W3 67 aa6.71□□□□□ -1.33
UBR4-202ENST00000375224 MRPS16Q9Y3D3 137 aaKnown RBP6.71□□□□□ -1.33
UBR4-202ENST00000375224 TRAPPC1Q9Y5R8 145 aa6.71□□□□□ -1.33
UBR4-202ENST00000375224 HYPMO75409 117 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 SPINK9Q5DT21 86 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 FFAR4Q5NUL3 377 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 TMEM200BQ69YZ2 307 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 ZNF833PQ6ZTB9 187 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 LINC00311Q8N616 119 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 H1FXQ92522 213 aaKnown RBP6.71□□□□□ -1.34
UBR4-202ENST00000375224 LHX4Q969G2 390 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 NPCDR1Q9BY65 106 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 VSIRQ9H7M9 311 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 TMEM14BQ9NUH8 114 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 ZNF257Q9Y2Q1 563 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 DOCK11Q5JSL3 2073 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 FRYQ5TBA9 3013 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 FBLL1A6NHQ2 334 aaKnown RBP6.71□□□□□ -1.34
UBR4-202ENST00000375224 FAM90A27PA6NNH2 459 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 ATXN7O15265 892 aaPredicted RBP6.71□□□□□ -1.34
UBR4-202ENST00000375224 FSTL3O95633 263 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 BAGE3Q86Y29 109 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 BAGE2Q86Y30 109 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 OR10G9Q8NGN4 311 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 OR10G7Q8NGN6 311 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 OR2T10Q8NGZ9 312 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 OSR1Q8TAX0 266 aaPredicted RBP6.71□□□□□ -1.34
UBR4-202ENST00000375224 PARLQ9H300 379 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 WDR83OSQ9Y284 106 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 PCNX1Q96RV3 2341 aa6.71□□□□□ -1.34
UBR4-202ENST00000375224 J3QR89 54 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 CT45A6P0DMU7 189 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 CT45A5P0DMU8 189 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 CT45A7P0DMV0 189 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 IGLC2P0DOY2 106 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 IGLC3P0DOY3 106 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 TSPOP30536 169 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 ZNF726P1Q15940 193 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 C1orf229Q6ZS94 237 aaPredicted RBP6.7□□□□□ -1.34
UBR4-202ENST00000375224 VKORC1L1Q8N0U8 176 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 TMEM256Q8N2U0 113 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 PNKDQ8N490 385 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 ZNF207O43670 478 aaKnown RBP6.7□□□□□ -1.34
UBR4-202ENST00000375224 RPL24P83731 157 aaKnown RBP6.7□□□□□ -1.34
UBR4-202ENST00000375224 OR5B3Q8NH48 314 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 SS18L2Q9UHA2 77 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 TRAV3A0A0B4J244 114 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 ZFP92A6NM28 416 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 UPK2O00526 184 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 IL3RAP26951 378 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 ACSM6Q6P461 480 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 MUC15Q8N387 334 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 RPP25LQ8N5L8 163 aaKnown RBP6.7□□□□□ -1.34
UBR4-202ENST00000375224 C5orf17Q8NAS9 161 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 OR1B1Q8NGR6 318 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 OR10X1Q8NGY0 326 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 LINC01560Q8TB33 94 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 NEUROG1Q92886 237 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 NEIL1Q96FI4 390 aaPredicted RBP6.7□□□□□ -1.34
UBR4-202ENST00000375224 FAM103A1Q9BTL3 118 aaKnown RBP6.7□□□□□ -1.34
UBR4-202ENST00000375224 MANBALQ9NQG1 85 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 WASHC3Q9Y3C0 194 aa6.7□□□□□ -1.34
UBR4-202ENST00000375224 FNDC10F2Z333 226 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 NPY1RP25929 384 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 PSMB3P49720 205 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 TFF3Q07654 80 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 UTF1Q5T230 341 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms