RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 C5orf64Q2M2E5 130 aa14.34□□□□□ -0.11
HLA-DQB1-201ENST00000374943 SPATA31B1PQ5VZV4 182 aa14.34□□□□□ -0.11
HLA-DQB1-201ENST00000374943 OR4F5Q8NH21 305 aa14.34□□□□□ -0.11
HLA-DQB1-201ENST00000374943 MALSU1Q96EH3 234 aa14.34□□□□□ -0.11
HLA-DQB1-201ENST00000374943 OR4F4Q96R69 305 aa14.34□□□□□ -0.11
HLA-DQB1-201ENST00000374943 LOC105371267A0A1B0GV96 52 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 PSMB11A5LHX3 300 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 PDE6DO43924 150 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 GCHFRP30047 84 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 SELENOTP62341 195 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 FAM78BQ5VT40 261 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 NPIPB3Q92617 1050 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 RNF2Q99496 336 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 MRPL32Q9BYC8 188 aaKnown RBP14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 LPAR2Q9HBW0 351 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 SDF2L1Q9HCN8 221 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 ARL2-SNX15V9GYD0 113 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 MED13LQ71F56 2210 aa14.33□□□□□ -0.11
HLA-DQB1-201ENST00000374943 UBR5O95071 2799 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQB1-201ENST00000374943 ZNF727A8MUV8 499 aa14.33□□□□□ -0.12
HLA-DQB1-201ENST00000374943 TMEM116Q8NCL8 245 aa14.33□□□□□ -0.12
HLA-DQB1-201ENST00000374943 C22orf15Q8WYQ4 148 aa14.33□□□□□ -0.12
HLA-DQB1-201ENST00000374943 MISP3Q96FF7 219 aa14.33□□□□□ -0.12
HLA-DQB1-201ENST00000374943 AJUBAQ96IF1 538 aa14.33□□□□□ -0.12
HLA-DQB1-201ENST00000374943 MRPL36Q9P0J6 103 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB1-201ENST00000374943 F6UZH7 168 aa14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 CLN5O75503 358 aa14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 GATA2P23769 480 aaPredicted RBP14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 RND2P52198 227 aa14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 HES1Q14469 280 aa14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 CLEC2AQ6UVW9 174 aa14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 MIR17HGQ75NE6 70 aa14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 C17orf50Q8WW18 174 aa14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 SMIM7Q9BQ49 75 aa14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 TECRQ9NZ01 308 aaKnown RBP14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 NAT8Q9UHE5 227 aa14.32□□□□□ -0.12
HLA-DQB1-201ENST00000374943 COL12A1Q99715 3063 aa14.31□□□□□ -0.12
HLA-DQB1-201ENST00000374943 CNIH1O95406 144 aa14.31□□□□□ -0.12
HLA-DQB1-201ENST00000374943 PAX1P15863 534 aa14.31□□□□□ -0.12
HLA-DQB1-201ENST00000374943 ATP5J2P56134 94 aa14.31□□□□□ -0.12
HLA-DQB1-201ENST00000374943 PAX8Q06710 450 aa14.31□□□□□ -0.12
HLA-DQB1-201ENST00000374943 FBLN7Q53RD9 439 aa14.31□□□□□ -0.12
HLA-DQB1-201ENST00000374943 TRGV9Q99603 122 aa14.31□□□□□ -0.12
HLA-DQB1-201ENST00000374943 PARLQ9H300 379 aa14.31□□□□□ -0.12
HLA-DQB1-201ENST00000374943 DMRT1Q9Y5R6 373 aa14.31□□□□□ -0.12
HLA-DQB1-201ENST00000374943 IGHV4-61A0A0C4DH41 118 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 FOLR2P14207 255 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 CTRB1P17538 263 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 CD24P25063 80 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 TAS2R45P59539 299 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 CTRB2Q6GPI1 263 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 PQLC2Q6ZP29 291 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 OR1L6Q8NGR2 347 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 TMEM37Q8WXS4 190 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 PFDN5Q99471 154 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 SLC25A33Q9BSK2 321 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 CXorf65A6NEN9 183 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 MT-ND4LP03901 98 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 APELAP0DMC3 54 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 ATP5G3P48201 142 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 UBE2G2P60604 165 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 FXYD3Q14802 87 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 ZNF562Q6V9R5 426 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 C19orf35Q6ZS72 473 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 LURAP1LQ8IV03 231 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 OR1L4Q8NGR5 311 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 HIST1H2BAQ96A08 127 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 RPUSD4Q96CM3 377 aaKnown RBP14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 YPEL4Q96NS1 127 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 TMEM167BQ9NRX6 74 aa14.3□□□□□ -0.12
HLA-DQB1-201ENST00000374943 OR2C1O95371 312 aa14.29□□□□□ -0.12
HLA-DQB1-201ENST00000374943 SAA4P35542 130 aa14.29□□□□□ -0.12
HLA-DQB1-201ENST00000374943 BPIFB3P59826 476 aa14.29□□□□□ -0.12
HLA-DQB1-201ENST00000374943 TMEM241Q24JQ0 296 aa14.29□□□□□ -0.12
HLA-DQB1-201ENST00000374943 CST9LP1Q5W188 147 aa14.29□□□□□ -0.12
HLA-DQB1-201ENST00000374943 DNAJC4Q9NNZ3 241 aa14.29□□□□□ -0.12
HLA-DQB1-201ENST00000374943 TMEM242Q9NWH2 141 aa14.29□□□□□ -0.12
HLA-DQB1-201ENST00000374943 I3L2K1 104 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 NPFFO15130 113 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 IGHV3-48P01763 117 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 C8orf88P0DMB2 117 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 TMEM11P17152 192 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 NPPCP23582 126 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 BRS3P32247 399 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 ZNF90Q03938 601 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 RNF212Q495C1 297 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 ISOC2Q96AB3 205 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 WNT10AQ9GZT5 417 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 TNFRSF19Q9NS68 423 aa14.28□□□□□ -0.12
HLA-DQB1-201ENST00000374943 FAM106CPP0CH98 169 aa14.27□□□□□ -0.12
HLA-DQB1-201ENST00000374943 DSCR9P59020 149 aa14.27□□□□□ -0.12
HLA-DQB1-201ENST00000374943 ZNF674Q2M3X9 581 aa14.27□□□□□ -0.12
HLA-DQB1-201ENST00000374943 RUSC1-AS1Q66K80 236 aa14.27□□□□□ -0.12
HLA-DQB1-201ENST00000374943 ZNF503Q96F45 646 aa14.27□□□□□ -0.12
HLA-DQB1-201ENST00000374943 C1RLQ9NZP8 487 aa14.27□□□□□ -0.12
HLA-DQB1-201ENST00000374943 PRELID1Q9Y255 219 aa14.27□□□□□ -0.12
HLA-DQB1-201ENST00000374943 YTHDF2Q9Y5A9 579 aaKnown RBP14.27□□□□□ -0.12
HLA-DQB1-201ENST00000374943 CENPVL3A0A0U1RRI6 287 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 NPIPB5A8MRT5 1133 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 COX7A2P2O60397 106 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 193.7 ms