RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 CAMPP49913 170 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 SELENOVP59797 346 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 C9orf106Q8NAJ2 232 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 RNASE8Q8TDE3 154 aaKnown RBP9.04□□□□□ -0.96
CCDC40-203ENST00000374877 ORAOV1Q8WV07 137 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 IGF2BP2-AS1Q96M15 143 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 SSBP4Q9BWG4 385 aaPredicted RBP9.04□□□□□ -0.96
CCDC40-203ENST00000374877 F2RL2O00254 374 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 C8orf88P0DMB2 117 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 RPL8P62917 257 aaKnown RBP9.04□□□□□ -0.96
CCDC40-203ENST00000374877 PMCHL1Q16048 86 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 FAM201AQ5SY85 155 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 LEMD1Q68G75 181 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 A0A1W2PRE2 83 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 SRRM5B3KS81 715 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 REG1AP05451 166 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 MORN5Q5VZ52 161 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 VWA1Q6PCB0 445 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 PIEZO1Q92508 2521 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 YLPM1P49750 1951 aaKnown RBP9.03□□□□□ -0.96
CCDC40-203ENST00000374877 MOGAT3Q86VF5 341 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 GCSAMQ8N6F7 178 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 ZNF738Q8NE65 137 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 SLC25A33Q9BSK2 321 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 PRNDQ9UKY0 176 aa9.03□□□□□ -0.96
CCDC40-203ENST00000374877 FAM181BA6NEQ2 426 aa9.02□□□□□ -0.96
CCDC40-203ENST00000374877 KIR2DL2P43627 348 aaPredicted RBP9.02□□□□□ -0.96
CCDC40-203ENST00000374877 KLRB1Q12918 225 aa9.02□□□□□ -0.96
CCDC40-203ENST00000374877 EBLN2Q6P2I7 272 aa9.02□□□□□ -0.96
CCDC40-203ENST00000374877 MRPL27Q9P0M9 148 aaKnown RBP9.02□□□□□ -0.96
CCDC40-203ENST00000374877 SPRNQ5BIV9 151 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 COMMD5Q9GZQ3 224 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 PLSCR4Q9NRQ2 329 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 ZNF835Q9Y2P0 537 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 AMMECR1Q9Y4X0 333 aaPredicted RBP9.02□□□□□ -0.97
CCDC40-203ENST00000374877 COX11Q9Y6N1 276 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 TRAV9-2A0A087WT02 112 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 IGKV1-16P04430 117 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 PYYP10082 97 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 PRCDQ00LT1 54 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 RTL8BQ17RB0 113 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 GDF5OSQ5U4N7 250 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 NUP35Q8NFH5 326 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 OR10W1Q8NGF6 305 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 ST6GALNAC6Q969X2 333 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 SAP30LQ9HAJ7 183 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 MRPS16Q9Y3D3 137 aaKnown RBP9.02□□□□□ -0.97
CCDC40-203ENST00000374877 ARFGEF3Q5TH69 2177 aa9.02□□□□□ -0.97
CCDC40-203ENST00000374877 IGHV2OR16-5A0A0B4J2B6 119 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 FNDC10F2Z333 226 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 IGLL1P15814 213 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 KLF3P57682 345 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-203ENST00000374877 UBE2G1P62253 170 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 MZT1Q08AG7 82 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 C17orf58Q2M2W7 97 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 SEM1Q6ZVN7 128 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 C1orf162Q8NEQ5 155 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-203ENST00000374877 SNRNP40Q96DI7 357 aaKnown RBP9.01□□□□□ -0.97
CCDC40-203ENST00000374877 OR2V2Q96R30 315 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 FAM215AQ9Y5M1 114 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 IGHV2-26A0A0B4J1V2 119 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 A0A1W2PN81 502 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 UBE2V1Q13404 147 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 DUX4L9Q6RFH8 374 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-203ENST00000374877 VHLLQ6RSH7 139 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 ERASQ7Z444 233 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 SGK494Q96LW2 274 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 CLEC5AQ9NY25 188 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 ZNRD1Q9P1U0 126 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 SPTBN2O15020 2390 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 NKX6-3A6NJ46 265 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 PRRG2O14669 202 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 IGHV3-48P01763 117 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 CEACAM8P31997 349 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-203ENST00000374877 DEFB108BQ8NET1 73 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 NUDT10Q8NFP7 164 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 OR2T6Q8NHC8 308 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 RND1Q92730 232 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 NUDT11Q96G61 164 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 TNFRSF19Q9NS68 423 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 TP73-AS1Q9UF72 201 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 ACACAQ13085 2346 aa9.01□□□□□ -0.97
CCDC40-203ENST00000374877 SRRM4A7MD48 611 aaKnown RBP9□□□□□ -0.97
CCDC40-203ENST00000374877 HIGD1CA8MV81 97 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 UPK2O00526 184 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 SPRY3O43610 288 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 RBPJQ06330 500 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 KIR3DL3Q8N743 410 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 OR2D3Q8NGH3 330 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 ADTRPQ96IZ2 230 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 OR8B2Q96RD0 313 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 C19orf24Q9BVV8 132 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 SLC25A2Q9BXI2 301 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 PROCRQ9UNN8 238 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 INTS1Q8N201 2190 aaKnown RBP9□□□□□ -0.97
CCDC40-203ENST00000374877 IGHV1-18A0A0C4DH31 117 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 KBTBD11-OT1A0A1B0GTJ5 212 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 TEX50A0A1B0GTY4 177 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 COX7A2P2O60397 106 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 CR1LQ2VPA4 569 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms