RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CYSRT1A8MQ03 144 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 FNDC10F2Z333 226 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 C16orf97H3BN30 126 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 K7EM74 188 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 SLC31A2O15432 143 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 CYB5BO43169 146 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 KBTBD11O94819 623 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 IGLV2-11P01706 119 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 S100A6P06703 90 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 FBP1P09467 338 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 SAA2P0DJI9 122 aaPredicted RBP3.85□□□□□ -1.79
USP48-202ENST00000374730 IRF2P14316 349 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 OPRK1P41145 380 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 CDC34P49427 236 aaPredicted RBP3.85□□□□□ -1.79
USP48-202ENST00000374730 PSMB3P49720 205 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 MEOX2P50222 304 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 CEBPGP53567 150 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 FGF8P55075 233 aaPredicted RBP3.85□□□□□ -1.79
USP48-202ENST00000374730 ATP5IP56385 69 aaPredicted RBP3.85□□□□□ -1.79
USP48-202ENST00000374730 EDDM3BP56851 147 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 OR2B8PP59922 312 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 CD81P60033 236 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 SNRPEP62304 92 aaKnown RBP3.85□□□□□ -1.79
USP48-202ENST00000374730 S100A12P80511 92 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 LTC4SQ16873 150 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 ACOT6Q3I5F7 207 aaPredicted RBP3.85□□□□□ -1.79
USP48-202ENST00000374730 RPL39P5Q59GN2 51 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 CT45A1Q5HYN5 189 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 ADAM5Q6NVV9 412 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 PQLC2Q6ZP29 291 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 DOLPP1Q86YN1 238 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 C1orf87Q8N0U7 546 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 OR10G9Q8NGN4 311 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 OR10G7Q8NGN6 311 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 CT45A3Q8NHU0 189 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 Q8WTZ3 238 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 TMEM186Q96B77 213 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 C12orf57Q99622 126 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 TXNDC17Q9BRA2 123 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 SLC25A22Q9H936 323 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 SDF2L1Q9HCN8 221 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 TMEM14BQ9NUH8 114 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 NAT8Q9UHE5 227 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 RPUSD1Q9UJJ7 312 aaKnown RBP3.85□□□□□ -1.79
USP48-202ENST00000374730 TCF19Q9Y242 345 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 ZNF835Q9Y2P0 537 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 LINC00312Q9Y6C7 94 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 MAP1BP46821 2468 aaKnown RBP3.85□□□□□ -1.79
USP48-202ENST00000374730 NAV2Q8IVL1 2488 aa3.85□□□□□ -1.79
USP48-202ENST00000374730 A0A1W2PPE3 182 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 hADV38S2A0JD32 116 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 ZNF727A8MUV8 499 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 CLDN34H7C241 214 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 SLC25A17O43808 307 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 EIF3GO75821 320 aaKnown RBP eCLIP3.84□□□□□ -1.79
USP48-202ENST00000374730 VENTXO95231 258 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 HRASP01112 189 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 CXCL1P09341 107 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 CD1BP29016 333 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 HSPE1P61604 102 aaKnown RBP3.84□□□□□ -1.79
USP48-202ENST00000374730 MRPS11P82912 194 aaKnown RBP3.84□□□□□ -1.79
USP48-202ENST00000374730 MEF2CQ06413 473 aaPredicted RBP3.84□□□□□ -1.79
USP48-202ENST00000374730 FABP9Q0Z7S8 132 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 SPINK9Q5DT21 86 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 FAM201AQ5SY85 155 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 OR4A47Q6IF82 309 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 FAM71F2Q6NXP2 309 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 TEX38Q6PEX7 206 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 DUX4L9Q6RFH8 374 aaPredicted RBP3.84□□□□□ -1.79
USP48-202ENST00000374730 SLC25A48Q6ZT89 311 aaKnown RBP3.84□□□□□ -1.79
USP48-202ENST00000374730 ZNF833PQ6ZTB9 187 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 C8orf31Q8N9H6 132 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 ZNF383Q8NA42 475 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 SLC24A4Q8NFF2 622 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 CCL13Q99616 98 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 SMIM7Q9BQ49 75 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 PYGO2Q9BRQ0 406 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 PCGF1Q9BSM1 259 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 GGTLC1Q9BX51 225 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 GAL3ST2Q9H3Q3 398 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 BET1LQ9NYM9 111 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 PRNDQ9UKY0 176 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 ZNF257Q9Y2Q1 563 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 ARFGEF3Q5TH69 2177 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 TNCP24821 2201 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 APC2O95996 2303 aa3.84□□□□□ -1.79
USP48-202ENST00000374730 DMXL2Q8TDJ6 3036 aa3.84□□□□□ -1.8
USP48-202ENST00000374730 KALRNO60229 2985 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 TGIF2-C20orf24A0A0A6YYL0 155 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 TRAV3A0A0B4J244 114 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 TRAV38-1A0A0B4J264 116 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 DPRXA6NFQ7 191 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 F6UZH7 168 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 INS-IGF2F8WCM5 200 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 UPK2O00526 184 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 PDE6DO43924 150 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 YIF1AO95070 293 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 GAS8-AS1O95177 125 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 IFNA10P01566 189 aa3.83□□□□□ -1.8
USP48-202ENST00000374730 GYPAP02724 150 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms