RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 UBE2L3P68036 154 aaKnown RBP13.79□□□□□ -0.2
RXRB-201ENST00000374680 PRR27Q6MZM9 219 aa13.79□□□□□ -0.2
RXRB-201ENST00000374680 A0A087X0M5 115 aa13.79□□□□□ -0.2
RXRB-201ENST00000374680 A0A1B0GX30 115 aa13.79□□□□□ -0.2
RXRB-201ENST00000374680 TOX4O94842 621 aa13.79□□□□□ -0.2
RXRB-201ENST00000374680 CD24P25063 80 aa13.79□□□□□ -0.2
RXRB-201ENST00000374680 LEMD1Q68G75 181 aa13.79□□□□□ -0.2
RXRB-201ENST00000374680 MRPL54Q6P161 138 aaKnown RBP13.79□□□□□ -0.2
RXRB-201ENST00000374680 NDUFA4L2Q9NRX3 87 aa13.79□□□□□ -0.2
RXRB-201ENST00000374680 CGB1A6NKQ9 187 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 FCN1O00602 326 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 OR4C13Q8NGP0 309 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 OR5B3Q8NH48 314 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 BET1LQ9NYM9 111 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.78□□□□□ -0.2
RXRB-201ENST00000374680 TNXAQ16473 311 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 POU2AF1Q16633 256 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 MMD2Q8IY49 270 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 ZNF664Q8N3J9 261 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 OR1L6Q8NGR2 347 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 ZNF257Q9Y2Q1 563 aa13.78□□□□□ -0.2
RXRB-201ENST00000374680 COX7A2P2O60397 106 aa13.77□□□□□ -0.2
RXRB-201ENST00000374680 AREGP15514 252 aa13.77□□□□□ -0.2
RXRB-201ENST00000374680 RANP62826 216 aaKnown RBP13.77□□□□□ -0.2
RXRB-201ENST00000374680 TBR1Q16650 682 aa13.77□□□□□ -0.2
RXRB-201ENST00000374680 C2orf83Q53S99 150 aa13.77□□□□□ -0.2
RXRB-201ENST00000374680 OR5AN1Q8NGI8 311 aa13.77□□□□□ -0.2
RXRB-201ENST00000374680 OSR1Q8TAX0 266 aaPredicted RBP13.77□□□□□ -0.2
RXRB-201ENST00000374680 ZNF355PQ9NSJ1 428 aa13.77□□□□□ -0.2
RXRB-201ENST00000374680 FKBP11Q9NYL4 201 aa13.77□□□□□ -0.2
RXRB-201ENST00000374680 SNURFLB1AK76 121 aa13.77□□□□□ -0.21
RXRB-201ENST00000374680 SHISA9B4DS77 424 aa13.77□□□□□ -0.21
RXRB-201ENST00000374680 GNG5P63218 68 aa13.77□□□□□ -0.21
RXRB-201ENST00000374680 JOSD1Q15040 202 aaPredicted RBP13.77□□□□□ -0.21
RXRB-201ENST00000374680 C3orf36Q3SXR2 165 aa13.77□□□□□ -0.21
RXRB-201ENST00000374680 TMEM18Q96B42 140 aa13.77□□□□□ -0.21
RXRB-201ENST00000374680 IGHV1-69-2A0A0G2JMI3 117 aa13.77□□□□□ -0.21
RXRB-201ENST00000374680 C14orf144Q96I85 54 aa13.77□□□□□ -0.21
RXRB-201ENST00000374680 SLC25A33Q9BSK2 321 aa13.77□□□□□ -0.21
RXRB-201ENST00000374680 MRPL18Q9H0U6 180 aaKnown RBP13.77□□□□□ -0.21
RXRB-201ENST00000374680 A0A1W2PPI3 338 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 VSTM5A8MXK1 200 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 TSTD3H0UI37 97 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 C8orf88P0DMB2 117 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 DDTP30046 118 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 FOXL1Q12952 345 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 OR1B1Q8NGR6 318 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 FAM168AQ92567 244 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 FAM103A1Q9BTL3 118 aaKnown RBP13.76□□□□□ -0.21
RXRB-201ENST00000374680 NCOR1P1Q9H4R4 102 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 DNAJC4Q9NNZ3 241 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 DLL1O00548 723 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 LCN2P80188 198 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 ST6GALNAC3Q8NDV1 305 aa13.76□□□□□ -0.21
RXRB-201ENST00000374680 ZNF705FA8MVS1 300 aaPredicted RBP13.75□□□□□ -0.21
RXRB-201ENST00000374680 ZNF705DP0CH99 300 aaPredicted RBP13.75□□□□□ -0.21
RXRB-201ENST00000374680 ZNF705BP0CI00 300 aaPredicted RBP13.75□□□□□ -0.21
RXRB-201ENST00000374680 MEF2CQ06413 473 aaPredicted RBP13.75□□□□□ -0.21
RXRB-201ENST00000374680 TMEM249Q2WGJ8 235 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 TIGITQ495A1 244 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 LINC00574Q9H8X3 128 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 IL36BQ9NZH7 164 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 TYMSP04818 313 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 IGHV1-8P0DP01 117 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 BAGE3Q86Y29 109 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 BAGE2Q86Y30 109 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 KIR3DL3Q8N743 410 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 TMEM167BQ9NRX6 74 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 WASHC3Q9Y3C0 194 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 S4R3C0 116 aa13.75□□□□□ -0.21
RXRB-201ENST00000374680 SPG11Q96JI7 2443 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 USF1P22415 310 aaPredicted RBP13.74□□□□□ -0.21
RXRB-201ENST00000374680 USF2Q15853 346 aaPredicted RBP13.74□□□□□ -0.21
RXRB-201ENST00000374680 PATE2Q6UY27 113 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 DMRTC2Q8IXT2 367 aaPredicted RBP13.74□□□□□ -0.21
RXRB-201ENST00000374680 NAT8BQ9UHF3 227 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 HRNRQ86YZ3 2850 aaPredicted RBP13.74□□□□□ -0.21
RXRB-201ENST00000374680 IGLV2-23P01705 113 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 CD99P14209 185 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 TAS2R45P59539 299 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 PKIAP61925 76 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 RPEL1Q2QD12 228 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 TMEM177Q53S58 311 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 C10orf113Q5VZT2 155 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 GBGT1Q8N5D6 347 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 MS4A10Q96PG2 267 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 SLC25A2Q9BXI2 301 aa13.74□□□□□ -0.21
RXRB-201ENST00000374680 PPOXP50336 477 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 CDSNQ15517 529 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 FBXL15Q9H469 300 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 V9GYV3 84 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 A0A1B0GV90 55 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 CRISP2P16562 243 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 ZNF600Q6ZNG1 722 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 LINC00305Q7Z4B0 112 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 ASCL2Q99929 193 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 PAXXQ9BUH6 204 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 INSIG2Q9Y5U4 225 aa13.73□□□□□ -0.21
RXRB-201ENST00000374680 SERF1AO75920 110 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms