RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SCO2A0A1W2PP80 73 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 PPP5D1E7EU14 171 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 IGHV2-70P01814 119 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 SMIM6P0DI80 62 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 HOXA5P20719 270 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 DLX1P56177 255 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 PSG5Q15238 335 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 CLEC12BQ2HXU8 276 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
HMGCL-202ENST00000374487 RITA1Q96K30 269 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 UHRF2Q96PU4 802 aa9.74□□□□□ -0.85
HMGCL-202ENST00000374487 TECRQ9NZ01 308 aaKnown RBP9.74□□□□□ -0.85
HMGCL-202ENST00000374487 A0A1W2PPQ1 181 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 OR7C2O60412 319 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 FSTL3O95633 263 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 TRGC1P0CF51 173 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 COX7A1P24310 79 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 TAS2R45P59539 299 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 KCNIP4Q6PIL6 250 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 OR8B3Q8NGG8 313 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 FRZBQ92765 325 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 OR8B2Q96RD0 313 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 ELOVL1Q9BW60 279 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 TPSG1Q9NRR2 321 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 TMEM167BQ9NRX6 74 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 CGB1A6NKQ9 187 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 BUB1B-PAK6H3BSN5 160 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 IGLV1-47P01700 117 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 SRP14P37108 136 aaKnown RBP9.73□□□□□ -0.85
HMGCL-202ENST00000374487 CDX1P47902 265 aaPredicted RBP9.73□□□□□ -0.85
HMGCL-202ENST00000374487 MRPL41Q8IXM3 137 aaKnown RBP9.73□□□□□ -0.85
HMGCL-202ENST00000374487 TIMD4Q96H15 378 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 SRD5A3Q9H8P0 318 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 MIOXQ9UGB7 285 aa9.73□□□□□ -0.85
HMGCL-202ENST00000374487 ZNF469Q96JG9 3925 aaPredicted RBP9.72□□□□□ -0.85
HMGCL-202ENST00000374487 PGPEP1LA6NFU8 196 aa9.72□□□□□ -0.85
HMGCL-202ENST00000374487 PPP1R2P9O14990 202 aa9.72□□□□□ -0.85
HMGCL-202ENST00000374487 REG1AP05451 166 aa9.72□□□□□ -0.85
HMGCL-202ENST00000374487 CD99P14209 185 aa9.72□□□□□ -0.85
HMGCL-202ENST00000374487 PQLC2Q6ZP29 291 aa9.72□□□□□ -0.85
HMGCL-202ENST00000374487 TEX45Q8NA69 505 aa9.72□□□□□ -0.85
HMGCL-202ENST00000374487 OR2T10Q8NGZ9 312 aa9.72□□□□□ -0.85
HMGCL-202ENST00000374487 RPEQ96AT9 228 aa9.72□□□□□ -0.85
HMGCL-202ENST00000374487 PYGO2Q9BRQ0 406 aa9.72□□□□□ -0.85
HMGCL-202ENST00000374487 ONECUT1Q9UBC0 465 aa9.72□□□□□ -0.85
HMGCL-202ENST00000374487 MAP1AP78559 2803 aaPredicted RBP9.72□□□□□ -0.85
HMGCL-202ENST00000374487 CCDC168Q8NDH2 2452 aa9.71□□□□□ -0.85
HMGCL-202ENST00000374487 IGHV1-3A0A0C4DH29 117 aa9.71□□□□□ -0.85
HMGCL-202ENST00000374487 LY6HO94772 140 aa9.71□□□□□ -0.85
HMGCL-202ENST00000374487 RBP4P02753 201 aa9.71□□□□□ -0.85
HMGCL-202ENST00000374487 S100A2P29034 98 aa9.71□□□□□ -0.85
HMGCL-202ENST00000374487 MMD2Q8IY49 270 aa9.71□□□□□ -0.85
HMGCL-202ENST00000374487 PNKDQ8N490 385 aa9.71□□□□□ -0.85
HMGCL-202ENST00000374487 BEND2Q8NDZ0 799 aa9.71□□□□□ -0.85
HMGCL-202ENST00000374487 NPIPB3Q92617 1050 aa9.71□□□□□ -0.85
HMGCL-202ENST00000374487 AMMECR1Q9Y4X0 333 aaPredicted RBP9.71□□□□□ -0.85
HMGCL-202ENST00000374487 TRBV20OR9-2A0A075B6H5 130 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 MDFIC2A0A1B0GVS7 189 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 A0A1W2PPI3 338 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 IGHV3-48P01763 117 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 LIPFP07098 398 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 SOD3P08294 240 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 OR5G3P0C626 314 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 HNF1AP20823 631 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 TNXAQ16473 311 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 PRSS8Q16651 343 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 ZNF114Q8NC26 417 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 SFRP2Q96HF1 295 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 DNAJC4Q9NNZ3 241 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 CBLN4Q9NTU7 201 aa9.71□□□□□ -0.86
HMGCL-202ENST00000374487 OR10J4P0C629 311 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 C8orf88P0DMB2 117 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 FAM3BP58499 235 aaPredicted RBP9.7□□□□□ -0.86
HMGCL-202ENST00000374487 TMEM37Q8WXS4 190 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 FNDC4Q9H6D8 234 aaPredicted RBP9.7□□□□□ -0.86
HMGCL-202ENST00000374487 GAR1Q9NY12 217 aaKnown RBP9.7□□□□□ -0.86
HMGCL-202ENST00000374487 ARL2-SNX15V9GYD0 113 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 ANKRD17O75179 2603 aaKnown RBP9.7□□□□□ -0.86
HMGCL-202ENST00000374487 PRRC2AP48634 2157 aaKnown RBP9.7□□□□□ -0.86
HMGCL-202ENST00000374487 COX7A2P2O60397 106 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 AREGP15514 252 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 CNTFRP26992 372 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 RPL27AP46776 148 aaKnown RBP9.7□□□□□ -0.86
HMGCL-202ENST00000374487 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 HCP5Q6MZN7 132 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 OR4X1Q8NH49 305 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 OCC1Q8TAD7 63 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 MISP3Q96FF7 219 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 RNF2Q99496 336 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 SLC25A33Q9BSK2 321 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 MRPL32Q9BYC8 188 aaKnown RBP9.7□□□□□ -0.86
HMGCL-202ENST00000374487 NIT2Q9NQR4 276 aa9.7□□□□□ -0.86
HMGCL-202ENST00000374487 MYO9AB2RTY4 2548 aa9.69□□□□□ -0.86
HMGCL-202ENST00000374487 MALRD1Q5VYJ5 2156 aa9.69□□□□□ -0.86
HMGCL-202ENST00000374487 ELOA3CA0A087WX78 387 aaPredicted RBP9.69□□□□□ -0.86
HMGCL-202ENST00000374487 GGCTO75223 188 aaKnown RBP9.69□□□□□ -0.86
HMGCL-202ENST00000374487 NDUFS7O75251 213 aa9.69□□□□□ -0.86
HMGCL-202ENST00000374487 APELAP0DMC3 54 aa9.69□□□□□ -0.86
HMGCL-202ENST00000374487 SSBP2P81877 361 aaPredicted RBP9.69□□□□□ -0.86
HMGCL-202ENST00000374487 PDZD11Q5EBL8 140 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms