RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 OCC1Q8TAD7 63 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 RNF2Q99496 336 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 KIAA1549Q9HCM3 1950 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 ELOA3CA0A087WX78 387 aaPredicted RBP11.09□□□□□ -0.63
CLIC4-201ENST00000374379 IGHV3-49A0A0A0MS15 119 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 C1QL4Q86Z23 238 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 AGMATQ9BSE5 352 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 TUBA4BQ9H853 241 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 P01737 135 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 RPL29P47914 159 aaKnown RBP11.09□□□□□ -0.63
CLIC4-201ENST00000374379 SELENOTP62341 195 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 UTF1Q5T230 341 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 SSX8Q7RTT4 187 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 OR1P1Q8NH06 330 aa11.09□□□□□ -0.63
CLIC4-201ENST00000374379 GNG5P63218 68 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 KLF17Q5JT82 389 aaPredicted RBP11.08□□□□□ -0.64
CLIC4-201ENST00000374379 C19orf35Q6ZS72 473 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 PPP1R14DQ9NXH3 145 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 CLEC5AQ9NY25 188 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 CA1P00915 261 aaPredicted RBP11.08□□□□□ -0.64
CLIC4-201ENST00000374379 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 CPAMD8Q8IZJ3 1885 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 IGLV2-14P01704 120 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 IGHV1-8P0DP01 117 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 CD69Q07108 199 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 C5orf30Q96GV9 206 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 TIMM23O14925 209 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 BRS3P32247 399 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 MRPL18Q9H0U6 180 aaKnown RBP11.08□□□□□ -0.64
CLIC4-201ENST00000374379 DPM3Q9P2X0 92 aa11.08□□□□□ -0.64
CLIC4-201ENST00000374379 ARHGAP32A7KAX9 2087 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 COL4A2P08572 1712 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 TRAV1-1A0A0B4J248 108 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 CGB1A6NKQ9 187 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 K7ENP7 123 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 IL4P05112 153 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 SLC25A48Q6ZT89 311 aaKnown RBP11.07□□□□□ -0.64
CLIC4-201ENST00000374379 FOXA2Q9Y261 457 aaPredicted RBP11.07□□□□□ -0.64
CLIC4-201ENST00000374379 USP9YO00507 2555 aaPredicted RBP11.07□□□□□ -0.64
CLIC4-201ENST00000374379 IGLV3-9A0A075B6K5 115 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 A0A087WWC5 75 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 A0A087X0M5 115 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 A0A1B0GX30 115 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 SRRM4A7MD48 611 aaKnown RBP11.07□□□□□ -0.64
CLIC4-201ENST00000374379 HSBP1L1C9JCN9 74 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 LOXL3P58215 753 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 IQCJQ1A5X6 159 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 PPP1R27Q86WC6 154 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 SRSF12Q8WXF0 261 aaKnown RBP11.07□□□□□ -0.64
CLIC4-201ENST00000374379 PAM16Q9Y3D7 125 aa11.07□□□□□ -0.64
CLIC4-201ENST00000374379 CHD3Q12873 2000 aaKnown RBP11.07□□□□□ -0.64
CLIC4-201ENST00000374379 USP34Q70CQ2 3546 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 TANC2Q9HCD6 1990 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 MYO9AB2RTY4 2548 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 FREM2Q5SZK8 3169 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 SRP14P37108 136 aaKnown RBP11.06□□□□□ -0.64
CLIC4-201ENST00000374379 FAM169BQ8N8A8 192 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 VN1R17PQ8TDU5 208 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 IGHV2-26A0A0B4J1V2 119 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 H0YJW9 148 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 OR2J3O76001 311 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 LY6EQ16553 131 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 GOLT1AQ6ZVE7 132 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 NOL4LQ96MY1 436 aaPredicted RBP11.06□□□□□ -0.64
CLIC4-201ENST00000374379 NBEAP1P0C6P0 100 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 DAZAP2Q15038 168 aaPredicted RBP11.06□□□□□ -0.64
CLIC4-201ENST00000374379 UNQ5815/PRO19632Q6UWF5 114 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 NUP37Q8NFH4 326 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 WNT10AQ9GZT5 417 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 NAV3Q8IVL0 2385 aa11.06□□□□□ -0.64
CLIC4-201ENST00000374379 IGHV3-66A0A0C4DH42 116 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 STAG3L2P0CL84 134 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 STAG3L3P0CL85 134 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 AREGP15514 252 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 CNTFRP26992 372 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 TMEM30BQ3MIR4 351 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 STXBP6Q8NFX7 210 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 HSPB9Q9BQS6 159 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 TXNDC17Q9BRA2 123 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 CHRDL1Q9BU40 450 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 COL25A1Q9BXS0 654 aaPredicted RBP11.05□□□□□ -0.64
CLIC4-201ENST00000374379 C1RLQ9NZP8 487 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 ASPHD1Q5U4P2 390 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 CCDC144NLQ6NUI1 221 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 OR52E5Q8NH55 327 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 YTHDF2Q9Y5A9 579 aaKnown RBP11.05□□□□□ -0.64
CLIC4-201ENST00000374379 TPSG1Q9NRR2 321 aa11.05□□□□□ -0.64
CLIC4-201ENST00000374379 MUC21A0A0G2JKD1 596 aa11.04□□□□□ -0.64
CLIC4-201ENST00000374379 MUC21A0A140T8X8 626 aa11.04□□□□□ -0.64
CLIC4-201ENST00000374379 C5orf52A6NGY3 159 aa11.04□□□□□ -0.64
CLIC4-201ENST00000374379 ZNF207O43670 478 aaKnown RBP11.04□□□□□ -0.64
CLIC4-201ENST00000374379 VENTXO95231 258 aa11.04□□□□□ -0.64
CLIC4-201ENST00000374379 MUC21Q5SSG8 566 aa11.04□□□□□ -0.64
CLIC4-201ENST00000374379 OR4A5Q8NH83 315 aa11.04□□□□□ -0.64
CLIC4-201ENST00000374379 ARL2-SNX15V9GYD0 113 aa11.04□□□□□ -0.64
CLIC4-201ENST00000374379 CCKARP32238 428 aa11.04□□□□□ -0.64
CLIC4-201ENST00000374379 PGLYRP4Q96LB8 373 aa11.04□□□□□ -0.64
CLIC4-201ENST00000374379 LINC00479Q96M42 142 aa11.04□□□□□ -0.64
CLIC4-201ENST00000374379 VAMP8Q9BV40 100 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms