RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SERF1AO75920 110 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 CCL3L1P16619 93 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 TMEM155Q4W5P6 130 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 COLCA1Q6ZS62 124 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 SLC25A2Q9BXI2 301 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 MSGN1A6NI15 193 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 PAX1P15863 534 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 LCTP09848 1927 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 A0A0G2JLM5 398 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 C17orf100A8MU93 164 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 C12orf77C9JDV5 145 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 CDK2AP2O75956 126 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 LHFPL4Q7Z7J7 247 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 GATD1Q8NB37 220 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 C1orf162Q8NEQ5 155 aaPredicted RBP11.97□□□□□ -0.49
TRAF1-201ENST00000373887 OR13A1Q8NGR1 328 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 ANKRD36A6QL64 1941 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 TRGV4A0A0C4DH28 118 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 NTN3O00634 580 aaPredicted RBP11.97□□□□□ -0.49
TRAF1-201ENST00000373887 S100A7L2Q5SY68 101 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 CHTOPQ9Y3Y2 248 aaKnown RBP11.97□□□□□ -0.49
TRAF1-201ENST00000373887 LINC00158P58513 81 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 EFEMP2O95967 443 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 UCP3P55916 312 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 PRR31Q5SQ13 230 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 DPM3Q9P2X0 92 aa11.97□□□□□ -0.49
TRAF1-201ENST00000373887 GGTLC3B5MD39 225 aa11.96□□□□□ -0.49
TRAF1-201ENST00000373887 ZNF48Q96MX3 618 aaPredicted RBP11.96□□□□□ -0.49
TRAF1-201ENST00000373887 NRN1Q9NPD7 142 aa11.96□□□□□ -0.49
TRAF1-201ENST00000373887 PEMTQ9UBM1 199 aa11.96□□□□□ -0.49
TRAF1-201ENST00000373887 SRP19P09132 144 aaKnown RBP11.96□□□□□ -0.49
TRAF1-201ENST00000373887 TMEM14DPA8MWL7 114 aa11.96□□□□□ -0.5
TRAF1-201ENST00000373887 CIARTQ8N365 385 aaPredicted RBP11.96□□□□□ -0.5
TRAF1-201ENST00000373887 TMEM167AQ8TBQ9 72 aa11.96□□□□□ -0.5
TRAF1-201ENST00000373887 LAMTOR2Q9Y2Q5 125 aa11.96□□□□□ -0.5
TRAF1-201ENST00000373887 THBDP07204 575 aa11.96□□□□□ -0.5
TRAF1-201ENST00000373887 VDAC2P45880 294 aaPredicted RBP11.96□□□□□ -0.5
TRAF1-201ENST00000373887 FLVCR1-AS1Q8TAF5 88 aa11.96□□□□□ -0.5
TRAF1-201ENST00000373887 SEPSECSQ9HD40 501 aaKnown RBP11.95□□□□□ -0.5
TRAF1-201ENST00000373887 TBX6O95947 436 aaPredicted RBP11.95□□□□□ -0.5
TRAF1-201ENST00000373887 TMEM30BQ3MIR4 351 aa11.95□□□□□ -0.5
TRAF1-201ENST00000373887 GREB1Q4ZG55 1949 aa11.95□□□□□ -0.5
TRAF1-201ENST00000373887 ADARB2-AS1A8MUL3 147 aa11.95□□□□□ -0.5
TRAF1-201ENST00000373887 CD33P20138 364 aa11.95□□□□□ -0.5
TRAF1-201ENST00000373887 DPM2O94777 84 aa11.95□□□□□ -0.5
TRAF1-201ENST00000373887 C1orf122Q6ZSJ8 110 aa11.95□□□□□ -0.5
TRAF1-201ENST00000373887 ICE1Q9Y2F5 2266 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 PRDM13Q9H4Q3 707 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 IGHV3-73A0A0B4J1V6 119 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 OSR1Q8TAX0 266 aaPredicted RBP11.94□□□□□ -0.5
TRAF1-201ENST00000373887 RALGAPA2Q2PPJ7 1873 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 IGHV1-18A0A0C4DH31 117 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 PQLC2LA1A4F0 135 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 ZNF562Q6V9R5 426 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 UBE2DNLQ8IWF7 75 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 LINC00527Q9UJ94 153 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 A6NNC1 897 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 TMEM249Q2WGJ8 235 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 TRAV40A0A0B4J280 105 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 E9PLN8 166 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 PRTN3P24158 256 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 CD300EQ496F6 205 aaPredicted RBP11.94□□□□□ -0.5
TRAF1-201ENST00000373887 OR9G4Q8NGQ1 327 aa11.94□□□□□ -0.5
TRAF1-201ENST00000373887 IFI6P09912 130 aa11.93□□□□□ -0.5
TRAF1-201ENST00000373887 C1QTNF9P0C862 333 aa11.93□□□□□ -0.5
TRAF1-201ENST00000373887 SRSF1Q07955 248 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAF1-201ENST00000373887 METRNQ9UJH8 293 aa11.93□□□□□ -0.5
TRAF1-201ENST00000373887 OTORQ9NRC9 128 aa11.93□□□□□ -0.5
TRAF1-201ENST00000373887 GHRHP01286 108 aa11.93□□□□□ -0.5
TRAF1-201ENST00000373887 SIGMAR1Q99720 223 aa11.93□□□□□ -0.5
TRAF1-201ENST00000373887 NAA38Q9BRA0 125 aaKnown RBP11.93□□□□□ -0.5
TRAF1-201ENST00000373887 M0R2P5 195 aa11.93□□□□□ -0.5
TRAF1-201ENST00000373887 Q0VFX4 171 aa11.93□□□□□ -0.5
TRAF1-201ENST00000373887 AHCTF1Q8WYP5 2266 aa11.93□□□□□ -0.5
TRAF1-201ENST00000373887 IGKCP01834 107 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 TCF20Q9UGU0 1960 aaKnown RBP11.92□□□□□ -0.5
TRAF1-201ENST00000373887 IGLV3-12A0A075B6K2 115 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 PYYP10082 97 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 RPL23P62829 140 aaKnown RBP11.92□□□□□ -0.5
TRAF1-201ENST00000373887 FOXL1Q12952 345 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 NYNRINQ9P2P1 1898 aaKnown RBP11.92□□□□□ -0.5
TRAF1-201ENST00000373887 LOC102723996A0A087X1L8 192 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 A0A1B0GW15 77 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 CACNA1IQ9P0X4 2223 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 FABP5P3A8MUU1 101 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 FOXG1P55316 489 aaPredicted RBP11.92□□□□□ -0.5
TRAF1-201ENST00000373887 C1QL4Q86Z23 238 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 KBTBD11-OT1A0A1B0GTJ5 212 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 Q6AWC8 147 aa11.92□□□□□ -0.5
TRAF1-201ENST00000373887 A8MWV9 139 aa11.91□□□□□ -0.5
TRAF1-201ENST00000373887 FGFBP3Q8TAT2 258 aa11.91□□□□□ -0.5
TRAF1-201ENST00000373887 CYSLTR1Q9Y271 337 aa11.91□□□□□ -0.5
TRAF1-201ENST00000373887 CD200R1LQ6Q8B3 271 aa11.91□□□□□ -0.5
TRAF1-201ENST00000373887 RTBDNQ9BSG5 229 aaPredicted RBP11.91□□□□□ -0.5
TRAF1-201ENST00000373887 LAMTOR3Q9UHA4 124 aa11.91□□□□□ -0.5
TRAF1-201ENST00000373887 TOMM40O96008 361 aa11.91□□□□□ -0.5
TRAF1-201ENST00000373887 PLNP26678 52 aa11.91□□□□□ -0.5
TRAF1-201ENST00000373887 ATXN8Q156A1 80 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms