RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 GTF3AQ92664 365 aaKnown RBP11.9□□□□□ -0.51
LMX1B-202ENST00000373474 SRSF7Q16629 238 aaKnown RBP eCLIP11.89□□□□□ -0.51
LMX1B-202ENST00000373474 TMEM249Q2WGJ8 235 aa11.89□□□□□ -0.51
LMX1B-202ENST00000373474 DUX5Q96PT3 197 aa11.89□□□□□ -0.51
LMX1B-202ENST00000373474 IGHV3OR16-12A0A075B7B8 117 aa11.89□□□□□ -0.51
LMX1B-202ENST00000373474 ASCL4Q6XD76 172 aa11.89□□□□□ -0.51
LMX1B-202ENST00000373474 TMEM190Q8WZ59 177 aa11.89□□□□□ -0.51
LMX1B-202ENST00000373474 M0R381 172 aa11.89□□□□□ -0.51
LMX1B-202ENST00000373474 CELA3BP08861 270 aa11.89□□□□□ -0.51
LMX1B-202ENST00000373474 CFAP161Q6P656 301 aa11.89□□□□□ -0.51
LMX1B-202ENST00000373474 ERG28Q9UKR5 140 aa11.89□□□□□ -0.51
LMX1B-202ENST00000373474 SPAG17Q6Q759 2223 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.88□□□□□ -0.51
LMX1B-202ENST00000373474 UBE2V1Q13404 147 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 TRAV12-3A0A0B4J271 114 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 LGALS1P09382 135 aaKnown RBP11.88□□□□□ -0.51
LMX1B-202ENST00000373474 CACNG8Q8WXS5 425 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 COQ2Q96H96 371 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 OTORQ9NRC9 128 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 A0A0G2JLM5 398 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 MST1P26927 711 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 ORMDL2Q53FV1 153 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 ATP5L2Q7Z4Y8 100 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 PIMREGQ9BSJ6 248 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 TRBV24-1A0A075B6N3 115 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 APOBEC3AP31941 199 aaPredicted RBP11.88□□□□□ -0.51
LMX1B-202ENST00000373474 PLAURQ03405 335 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 OR52E5Q8NH55 327 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 SCN2AQ99250 2005 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 IGKV1D-8A0A087WSZ0 117 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 DCTN5Q9BTE1 182 aa11.88□□□□□ -0.51
LMX1B-202ENST00000373474 RTN4RL2Q86UN3 420 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 CYTL1Q9NRR1 136 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 CHTOPQ9Y3Y2 248 aaKnown RBP11.87□□□□□ -0.51
LMX1B-202ENST00000373474 YPEL1O60688 119 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 CD5P06127 495 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 IFI27P40305 119 aaPredicted RBP11.87□□□□□ -0.51
LMX1B-202ENST00000373474 ID3Q02535 119 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 YPEL2Q96QA6 119 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 VKORC1Q9BQB6 163 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
LMX1B-202ENST00000373474 SCN8AQ9UQD0 1980 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 PLXNA3P51805 1871 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 TRAV5A0A0B4J249 113 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 CLPSP04118 112 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 CRYGSP22914 178 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 LTBRP36941 435 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 CITED1Q99966 193 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 SEMA5BQ9P283 1151 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 FAM216BQ8N7L0 139 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 SPANXDQ9BXN6 97 aa11.87□□□□□ -0.51
LMX1B-202ENST00000373474 FOXD3Q9UJU5 478 aaPredicted RBP11.86□□□□□ -0.51
LMX1B-202ENST00000373474 LINC00312Q9Y6C7 94 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 AMBPP02760 352 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 FAM201AQ5SY85 155 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 LHFPL1Q86WI0 220 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 REG4Q9BYZ8 158 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 C9JCJ5 164 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 TMEM155Q4W5P6 130 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 PLSCR4Q9NRQ2 329 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 C15orf61A6NNL5 157 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 TPTE2P1Q5T6R2 138 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 SAA2-SAA4A0A096LPE2 208 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 M0R2P5 195 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 RAMP3O60896 148 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 SAA2P0DJI9 122 aaPredicted RBP11.86□□□□□ -0.51
LMX1B-202ENST00000373474 ASCL2Q99929 193 aa11.86□□□□□ -0.51
LMX1B-202ENST00000373474 FAM90A9PA6NNJ1 464 aa11.85□□□□□ -0.51
LMX1B-202ENST00000373474 UPK2O00526 184 aa11.85□□□□□ -0.51
LMX1B-202ENST00000373474 TRAV2A0A0B4J234 112 aa11.85□□□□□ -0.51
LMX1B-202ENST00000373474 A0A1B0GW64 132 aa11.85□□□□□ -0.51
LMX1B-202ENST00000373474 Q9H3A6 140 aa11.85□□□□□ -0.51
LMX1B-202ENST00000373474 TNFRSF6BO95407 300 aa11.85□□□□□ -0.51
LMX1B-202ENST00000373474 LHFPL4Q7Z7J7 247 aa11.85□□□□□ -0.51
LMX1B-202ENST00000373474 FAM27E3Q08E93 113 aa11.85□□□□□ -0.51
LMX1B-202ENST00000373474 TMEM144Q7Z5S9 345 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 DLX4Q92988 240 aaPredicted RBP11.84□□□□□ -0.51
LMX1B-202ENST00000373474 TDRD6O60522 2096 aaKnown RBP11.84□□□□□ -0.51
LMX1B-202ENST00000373474 COLCA2A8K830 154 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 TMEM238C9JI98 176 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 MORN2Q502X0 79 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 OVOL2Q9BRP0 275 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 FBXL15Q9H469 300 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 NABP1Q96AH0 204 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 IFI27L1Q96BM0 104 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 TOMM7Q9P0U1 55 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 SAA1P0DJI8 122 aaPredicted RBP11.84□□□□□ -0.51
LMX1B-202ENST00000373474 RASL11AQ6T310 242 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 EDA2RQ9HAV5 297 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 FOXA2Q9Y261 457 aaPredicted RBP11.84□□□□□ -0.51
LMX1B-202ENST00000373474 DPH3Q96FX2 82 aa11.84□□□□□ -0.51
LMX1B-202ENST00000373474 CD55P08174 381 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 SUPT4H1P63272 117 aaKnown RBP11.83□□□□□ -0.52
LMX1B-202ENST00000373474 GLRX5Q86SX6 157 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 PRR19A6NJB7 356 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 EFNA2O43921 213 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 IGHV3-23P01764 117 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 SFTA2Q6UW10 78 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 C9orf106Q8NAJ2 232 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 GTSF1LQ9H1H1 148 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms