RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 IGLC7A0M8Q6 106 aa15.05■□□□□ -0
USP49-202ENST00000373010 FABP1P07148 127 aa15.05■□□□□ -0
USP49-202ENST00000373010 C8orf88P0DMB2 117 aa15.05■□□□□ -0
USP49-202ENST00000373010 FABP4P15090 132 aa15.05■□□□□ -0
USP49-202ENST00000373010 TAS2R45P59539 299 aa15.05■□□□□ -0
USP49-202ENST00000373010 PRSS8Q16651 343 aa15.05■□□□□ -0
USP49-202ENST00000373010 TEX45Q8NA69 505 aa15.05■□□□□ -0
USP49-202ENST00000373010 MIOXQ9UGB7 285 aa15.05■□□□□ -0
USP49-202ENST00000373010 ARHGAP32A7KAX9 2087 aa15.05■□□□□ -0
USP49-202ENST00000373010 COL6A6A6NMZ7 2263 aa15.04■□□□□ -0
USP49-202ENST00000373010 ZNF320A2RRD8 509 aa15.04■□□□□ -0
USP49-202ENST00000373010 ACTL10Q5JWF8 245 aa15.04■□□□□ -0
USP49-202ENST00000373010 OR10G8Q8NGN5 311 aa15.04■□□□□ -0
USP49-202ENST00000373010 FAM167A-AS1Q96KT0 104 aa15.04■□□□□ -0
USP49-202ENST00000373010 SLC25A2Q9BXI2 301 aa15.04■□□□□ -0
USP49-202ENST00000373010 DNAJC4Q9NNZ3 241 aa15.04■□□□□ -0
USP49-202ENST00000373010 PITPNC1Q9UKF7 332 aa15.04■□□□□ -0
USP49-202ENST00000373010 HRNRQ86YZ3 2850 aaPredicted RBP15.04■□□□□ -0
USP49-202ENST00000373010 GGTLC3B5MD39 225 aa15.04■□□□□ -0
USP49-202ENST00000373010 MFAP2P55001 183 aa15.04■□□□□ -0
USP49-202ENST00000373010 LGALS4P56470 323 aa15.04■□□□□ -0
USP49-202ENST00000373010 CDPF1Q6NVV7 123 aa15.04■□□□□ -0
USP49-202ENST00000373010 ONECUT1Q9UBC0 465 aa15.04■□□□□ -0
USP49-202ENST00000373010 CRYGBP07316 175 aa15.03■□□□□ -0
USP49-202ENST00000373010 MMD2Q8IY49 270 aa15.03■□□□□ -0
USP49-202ENST00000373010 OR8B3Q8NGG8 313 aa15.03■□□□□ -0
USP49-202ENST00000373010 MISP3Q96FF7 219 aa15.03■□□□□ -0
USP49-202ENST00000373010 EAF1Q96JC9 268 aaPredicted RBP15.03■□□□□ -0
USP49-202ENST00000373010 OR8B2Q96RD0 313 aa15.03■□□□□ -0
USP49-202ENST00000373010 ARL2-SNX15V9GYD0 113 aa15.03■□□□□ -0
USP49-202ENST00000373010 TCRBV4S1A1TA0A5B7 111 aa15.03■□□□□ -0
USP49-202ENST00000373010 SLC17A3O00476 420 aa15.03■□□□□ -0
USP49-202ENST00000373010 RPL27AP46776 148 aaKnown RBP15.03■□□□□ -0
USP49-202ENST00000373010 LCN2P80188 198 aa15.03■□□□□ -0
USP49-202ENST00000373010 PATE2Q6UY27 113 aa15.03■□□□□ -0
USP49-202ENST00000373010 BEND2Q8NDZ0 799 aa15.03■□□□□ -0
USP49-202ENST00000373010 MRPL32Q9BYC8 188 aaKnown RBP15.03■□□□□ -0
USP49-202ENST00000373010 OR51M1Q9H341 326 aa15.03■□□□□ -0
USP49-202ENST00000373010 SIGLEC9Q9Y336 463 aa15.03■□□□□ -0
USP49-202ENST00000373010 C22orf46C9J442 243 aa15.02■□□□□ -0
USP49-202ENST00000373010 C9JCJ5 164 aa15.02■□□□□ -0
USP49-202ENST00000373010 COX7A2P2O60397 106 aa15.02■□□□□ -0
USP49-202ENST00000373010 SUMO1P63165 101 aaKnown RBP15.02■□□□□ -0
USP49-202ENST00000373010 FOXL1Q12952 345 aa15.02■□□□□ -0
USP49-202ENST00000373010 OR5I1Q13606 314 aa15.02■□□□□ -0
USP49-202ENST00000373010 OR5AU1Q8NGC0 362 aa15.02■□□□□ -0
USP49-202ENST00000373010 IMMP2LQ96T52 175 aa15.02■□□□□ -0
USP49-202ENST00000373010 XKRY2A2RUG3 117 aa15.02□□□□□ -0.01
USP49-202ENST00000373010 HELTA6NFD8 242 aa15.02□□□□□ -0.01
USP49-202ENST00000373010 FSTL3O95633 263 aa15.02□□□□□ -0.01
USP49-202ENST00000373010 CENPWQ5EE01 88 aa15.02□□□□□ -0.01
USP49-202ENST00000373010 THAP8Q8NA92 274 aa15.02□□□□□ -0.01
USP49-202ENST00000373010 RPEQ96AT9 228 aa15.02□□□□□ -0.01
USP49-202ENST00000373010 IGHV3-21A0A0B4J1V1 117 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 PYYP10082 97 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 UBE2L3P68036 154 aaKnown RBP15.01□□□□□ -0.01
USP49-202ENST00000373010 C10orf113Q5VZT2 155 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 TMEM183AQ8IXX5 376 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 OR1P1Q8NH06 330 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 C8orf46Q8TAG6 207 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 HIST1H2BLQ99880 126 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 RAB1BQ9H0U4 201 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 ZNF355PQ9NSJ1 428 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 LINC00587B1AMM8 73 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 MOSP00540 346 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 RPL15P61313 204 aaKnown RBP15.01□□□□□ -0.01
USP49-202ENST00000373010 LDLRAD2Q5SZI1 272 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 FBXL15Q9H469 300 aa15.01□□□□□ -0.01
USP49-202ENST00000373010 COMPP49747 757 aaPredicted RBP15□□□□□ -0.01
USP49-202ENST00000373010 GNG4P50150 75 aa15□□□□□ -0.01
USP49-202ENST00000373010 RNF2Q99496 336 aa15□□□□□ -0.01
USP49-202ENST00000373010 RBP4P02753 201 aa15□□□□□ -0.01
USP49-202ENST00000373010 IGFBPL1Q8WX77 278 aa15□□□□□ -0.01
USP49-202ENST00000373010 CHODLQ9H9P2 273 aa15□□□□□ -0.01
USP49-202ENST00000373010 LY96Q9Y6Y9 160 aa15□□□□□ -0.01
USP49-202ENST00000373010 A0A1W2PRE2 83 aa14.99□□□□□ -0.01
USP49-202ENST00000373010 LY6LH3BQJ8 138 aa14.99□□□□□ -0.01
USP49-202ENST00000373010 LIPFP07098 398 aa14.99□□□□□ -0.01
USP49-202ENST00000373010 SNRPCP09234 159 aaKnown RBP14.99□□□□□ -0.01
USP49-202ENST00000373010 ARF6P62330 175 aa14.99□□□□□ -0.01
USP49-202ENST00000373010 PPP1R27Q86WC6 154 aa14.99□□□□□ -0.01
USP49-202ENST00000373010 OR1L4Q8NGR5 311 aa14.99□□□□□ -0.01
USP49-202ENST00000373010 PFDN5Q99471 154 aa14.99□□□□□ -0.01
USP49-202ENST00000373010 CBLN4Q9NTU7 201 aa14.99□□□□□ -0.01
USP49-202ENST00000373010 TRAPPC1Q9Y5R8 145 aa14.99□□□□□ -0.01
USP49-202ENST00000373010 FCN1O00602 326 aa14.98□□□□□ -0.01
USP49-202ENST00000373010 CRYGCP07315 174 aa14.98□□□□□ -0.01
USP49-202ENST00000373010 LHFPL4Q7Z7J7 247 aa14.98□□□□□ -0.01
USP49-202ENST00000373010 LY6G5BQ8NDX9 201 aa14.98□□□□□ -0.01
USP49-202ENST00000373010 PACRGQ96M98 296 aaPredicted RBP14.98□□□□□ -0.01
USP49-202ENST00000373010 TNFRSF19Q9NS68 423 aa14.98□□□□□ -0.01
USP49-202ENST00000373010 PVRIGQ6DKI7 326 aa14.98□□□□□ -0.01
USP49-202ENST00000373010 PAXXQ9BUH6 204 aa14.98□□□□□ -0.01
USP49-202ENST00000373010 AMMECR1Q9Y4X0 333 aaPredicted RBP14.98□□□□□ -0.01
USP49-202ENST00000373010 TEX22C9J3V5 150 aa14.97□□□□□ -0.01
USP49-202ENST00000373010 BPIFB3P59826 476 aa14.97□□□□□ -0.01
USP49-202ENST00000373010 ERVFC1-1P60608 527 aa14.97□□□□□ -0.01
USP49-202ENST00000373010 SELENOTP62341 195 aa14.97□□□□□ -0.01
USP49-202ENST00000373010 C11orf71Q6IPW1 123 aa14.97□□□□□ -0.01
USP49-202ENST00000373010 MRPL41Q8IXM3 137 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms