RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 SPAG8Q99932 426 aaPredicted RBP16.96■□□□□ 0.31
COL9A2-201ENST00000372736 SPATA25Q9BR10 227 aa16.96■□□□□ 0.31
COL9A2-201ENST00000372736 MRPL36Q9P0J6 103 aaKnown RBP16.96■□□□□ 0.31
COL9A2-201ENST00000372736 SHPKQ9UHJ6 478 aa16.96■□□□□ 0.31
COL9A2-201ENST00000372736 TSPAN4O14817 238 aa16.95■□□□□ 0.3
COL9A2-201ENST00000372736 NXPH3O95157 252 aa16.95■□□□□ 0.3
COL9A2-201ENST00000372736 OPRK1P41145 380 aa16.95■□□□□ 0.3
COL9A2-201ENST00000372736 HTR2BP41595 481 aa16.95■□□□□ 0.3
COL9A2-201ENST00000372736 SRPXP78539 464 aa16.95■□□□□ 0.3
COL9A2-201ENST00000372736 ANKRD55Q3KP44 614 aa16.95■□□□□ 0.3
COL9A2-201ENST00000372736 HEYLQ9NQ87 328 aaPredicted RBP16.95■□□□□ 0.3
COL9A2-201ENST00000372736 SMPXQ9UHP9 88 aa16.95■□□□□ 0.3
COL9A2-201ENST00000372736 IGHV7-4-1A0A0J9YVY3 117 aa16.94■□□□□ 0.3
COL9A2-201ENST00000372736 CEBPZOSA8MTT3 80 aa16.94■□□□□ 0.3
COL9A2-201ENST00000372736 YIF1AO95070 293 aa16.94■□□□□ 0.3
COL9A2-201ENST00000372736 ANXA3P12429 323 aa16.94■□□□□ 0.3
COL9A2-201ENST00000372736 TMEM128Q5BJH2 165 aa16.94■□□□□ 0.3
COL9A2-201ENST00000372736 LGI3Q8N145 548 aa16.94■□□□□ 0.3
COL9A2-201ENST00000372736 SLC25A21Q9BQT8 299 aaPredicted RBP16.94■□□□□ 0.3
COL9A2-201ENST00000372736 TMEM50AO95807 157 aa16.93■□□□□ 0.3
COL9A2-201ENST00000372736 CCR6P51684 374 aa16.93■□□□□ 0.3
COL9A2-201ENST00000372736 BAK1Q16611 211 aa16.93■□□□□ 0.3
COL9A2-201ENST00000372736 C2orf83Q53S99 150 aa16.93■□□□□ 0.3
COL9A2-201ENST00000372736 TOMM20LQ6UXN7 152 aa16.93■□□□□ 0.3
COL9A2-201ENST00000372736 SLC24A4Q8NFF2 622 aa16.93■□□□□ 0.3
COL9A2-201ENST00000372736 TMEM170AQ8WVE7 144 aa16.93■□□□□ 0.3
COL9A2-201ENST00000372736 ZFAND3Q9H8U3 227 aa16.93■□□□□ 0.3
COL9A2-201ENST00000372736 CHEK1O14757 476 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 TNFRSF9Q07011 255 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 SMCO1Q147U7 214 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 MLANAQ16655 118 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 LAMTOR1Q6IAA8 161 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 ZNF600Q6ZNG1 722 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 TMEM116Q8NCL8 245 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 OR4X1Q8NH49 305 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 RNF2Q99496 336 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 SDHCQ99643 169 aaPredicted RBP16.92■□□□□ 0.3
COL9A2-201ENST00000372736 RHPN1-AS1Q9BWJ2 59 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 HSPB7Q9UBY9 170 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 CACFD1Q9UGQ2 172 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 DNAH7Q8WXX0 4024 aa16.92■□□□□ 0.3
COL9A2-201ENST00000372736 KMT2CQ8NEZ4 4911 aaKnown RBP16.91■□□□□ 0.3
COL9A2-201ENST00000372736 IGHV3-49A0A0A0MS15 119 aa16.91■□□□□ 0.3
COL9A2-201ENST00000372736 CLN5O75503 358 aa16.91■□□□□ 0.3
COL9A2-201ENST00000372736 CITED4Q96RK1 184 aa16.91■□□□□ 0.3
COL9A2-201ENST00000372736 HIPK2Q9H2X6 1198 aa16.91■□□□□ 0.3
COL9A2-201ENST00000372736 RETNQ9HD89 108 aa16.91■□□□□ 0.3
COL9A2-201ENST00000372736 PUS1Q9Y606 427 aaKnown RBP eCLIP16.91■□□□□ 0.3
COL9A2-201ENST00000372736 TRAV14DV4A0A0A6YYC5 116 aa16.9■□□□□ 0.3
COL9A2-201ENST00000372736 A0A1B0GU03 582 aa16.9■□□□□ 0.3
COL9A2-201ENST00000372736 DUXBA0A1W2PPF3 345 aa16.9■□□□□ 0.3
COL9A2-201ENST00000372736 VAMP1P23763 118 aa16.9■□□□□ 0.3
COL9A2-201ENST00000372736 PPP1R1AQ13522 171 aa16.9■□□□□ 0.3
COL9A2-201ENST00000372736 RBMS2Q15434 407 aaKnown RBP16.9■□□□□ 0.3
COL9A2-201ENST00000372736 RNASEH2CQ8TDP1 164 aaKnown RBP16.9■□□□□ 0.3
COL9A2-201ENST00000372736 GINS3Q9BRX5 216 aa16.9■□□□□ 0.3
COL9A2-201ENST00000372736 RPS10-NUDT3A0A1W2PQS6 291 aa16.89■□□□□ 0.29
COL9A2-201ENST00000372736 NPY1RP25929 384 aa16.89■□□□□ 0.29
COL9A2-201ENST00000372736 ODF3L2Q3SX64 289 aa16.89■□□□□ 0.29
COL9A2-201ENST00000372736 TRIQKQ629K1 86 aa16.89■□□□□ 0.29
COL9A2-201ENST00000372736 LRTM2Q8N967 370 aa16.89■□□□□ 0.29
COL9A2-201ENST00000372736 RBKSQ9H477 322 aa16.89■□□□□ 0.29
COL9A2-201ENST00000372736 EDA2RQ9HAV5 297 aa16.89■□□□□ 0.29
COL9A2-201ENST00000372736 NDUFA13Q9P0J0 144 aa16.89■□□□□ 0.29
COL9A2-201ENST00000372736 IGHV3OR16-13A0A075B7E8 117 aa16.88■□□□□ 0.29
COL9A2-201ENST00000372736 IGHV3-74A0A0B4J1X5 117 aa16.88■□□□□ 0.29
COL9A2-201ENST00000372736 PIGBOS1A0A0B4J2F0 54 aa16.88■□□□□ 0.29
COL9A2-201ENST00000372736 SFT2D2O95562 160 aa16.88■□□□□ 0.29
COL9A2-201ENST00000372736 IGKV1-17P01599 117 aa16.88■□□□□ 0.29
COL9A2-201ENST00000372736 PRSS54Q6PEW0 395 aa16.88■□□□□ 0.29
COL9A2-201ENST00000372736 CENPSQ8N2Z9 138 aa16.88■□□□□ 0.29
COL9A2-201ENST00000372736 MUC7Q8TAX7 377 aa16.88■□□□□ 0.29
COL9A2-201ENST00000372736 DTD1Q8TEA8 209 aa16.88■□□□□ 0.29
COL9A2-201ENST00000372736 UBQLN2Q9UHD9 624 aa16.88■□□□□ 0.29
COL9A2-201ENST00000372736 NAP1L6A6NFF2 107 aa16.87■□□□□ 0.29
COL9A2-201ENST00000372736 OR4C46A6NHA9 309 aa16.87■□□□□ 0.29
COL9A2-201ENST00000372736 C3orf84H3BNL1 204 aa16.87■□□□□ 0.29
COL9A2-201ENST00000372736 PITX3O75364 302 aa16.87■□□□□ 0.29
COL9A2-201ENST00000372736 APOHP02749 345 aaPredicted RBP16.87■□□□□ 0.29
COL9A2-201ENST00000372736 INPP1P49441 399 aa16.87■□□□□ 0.29
COL9A2-201ENST00000372736 FAM90A2PQ658T7 463 aa16.87■□□□□ 0.29
COL9A2-201ENST00000372736 OR1S1Q8NH92 325 aa16.87■□□□□ 0.29
COL9A2-201ENST00000372736 ST8SIA2Q92186 375 aa16.87■□□□□ 0.29
COL9A2-201ENST00000372736 VSIRQ9H7M9 311 aa16.87■□□□□ 0.29
COL9A2-201ENST00000372736 SLC25A4P12235 298 aa16.86■□□□□ 0.29
COL9A2-201ENST00000372736 RND2P52198 227 aa16.86■□□□□ 0.29
COL9A2-201ENST00000372736 TIGITQ495A1 244 aa16.86■□□□□ 0.29
COL9A2-201ENST00000372736 FAM110AQ9BQ89 295 aa16.86■□□□□ 0.29
COL9A2-201ENST00000372736 GGTLC1Q9BX51 225 aa16.86■□□□□ 0.29
COL9A2-201ENST00000372736 SCGB2A1O75556 95 aa16.85■□□□□ 0.29
COL9A2-201ENST00000372736 NDUFB6O95139 128 aa16.85■□□□□ 0.29
COL9A2-201ENST00000372736 IGLC1P0CG04 106 aa16.85■□□□□ 0.29
COL9A2-201ENST00000372736 BTCP35070 178 aa16.85■□□□□ 0.29
COL9A2-201ENST00000372736 UBE2MP61081 183 aaKnown RBP16.85■□□□□ 0.29
COL9A2-201ENST00000372736 NOXA1Q86UR1 476 aa16.85■□□□□ 0.29
COL9A2-201ENST00000372736 U3KQ87 197 aa16.85■□□□□ 0.29
COL9A2-201ENST00000372736 TRAV30A0A087WSZ9 112 aa16.84■□□□□ 0.29
COL9A2-201ENST00000372736 LOC102724200A0A096LPH7 203 aaPredicted RBP16.84■□□□□ 0.29
COL9A2-201ENST00000372736 IFNA10P01566 189 aa16.84■□□□□ 0.29
COL9A2-201ENST00000372736 SLC25A6P12236 298 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms