RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 KCNIP1Q9NZI2 227 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 KMT2EQ8IZD2 1858 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 TRBV6-6A0A0A6YYG2 114 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 IGHV2-26A0A0B4J1V2 119 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 IGHV2-70DA0A0C4DH43 119 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 LINC00869P0C866 280 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 TNFSF4P23510 183 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 FKBP2P26885 142 aaKnown RBP4.43□□□□□ -1.7
ATG4A-204ENST00000372246 ARR3P36575 388 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 VDAC2P45880 294 aaPredicted RBP4.43□□□□□ -1.7
ATG4A-204ENST00000372246 ERVK11-1P61568 191 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 PLP2Q04941 152 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 SRSF7Q16629 238 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATG4A-204ENST00000372246 ATP1A1-AS1Q5TC04 95 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 RND1Q92730 232 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 GNB1LQ9BYB4 327 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 WDR54Q9H977 334 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 TNFRSF19Q9NS68 423 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 TMEM140Q9NV12 185 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 GNG12Q9UBI6 72 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 ZNF391Q9UJN7 358 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 TCF19Q9Y242 345 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 CEP250Q9BV73 2442 aa4.43□□□□□ -1.7
ATG4A-204ENST00000372246 A0A1W2PRD5 423 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 A0A1W2PRF3 423 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 A0A1W2PRM7 423 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 C2orf70A6NJV1 201 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 GJE1A6NN92 205 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 FAM90A26D6RGX4 464 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 E7EUB6 86 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 ISLRO14498 428 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 SS18L1O75177 396 aaPredicted RBP4.42□□□□□ -1.7
ATG4A-204ENST00000372246 TOMM40O96008 361 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 DUTP33316 252 aaKnown RBP4.42□□□□□ -1.7
ATG4A-204ENST00000372246 OPRK1P41145 380 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 GPR12P47775 334 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 RPS20P60866 119 aaKnown RBP4.42□□□□□ -1.7
ATG4A-204ENST00000372246 TM4SF20Q53R12 229 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 OCIAD2Q56VL3 154 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 DCAF12Q5T6F0 453 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 PPP1R32Q7Z5V6 425 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 C11orf53Q8IXP5 236 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 CD177Q8N6Q3 437 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 NUP35Q8NFH5 326 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 KCNE4Q8WWG9 221 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 DPF1Q92782 380 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 BCL2L2Q92843 193 aaPredicted RBP4.42□□□□□ -1.7
ATG4A-204ENST00000372246 TMEM45BQ96B21 275 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 SMIM12Q96EX1 92 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 NABP2Q9BQ15 211 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 HES4Q9HCC6 221 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 POLDIP2Q9Y2S7 368 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 RAXQ9Y2V3 346 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 HILPDAQ9Y5L2 63 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 PCNX2A6NKB5 2137 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 LOC102723996A0A087X1L8 192 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 TMEM30CPA0ZSE6 113 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 OR4C46A6NHA9 309 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 PPIAL4DF5H284 164 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 IGKV1-16P04430 117 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 AMY1AP04745 511 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 FAM106CPP0CH98 169 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 ARG2P78540 354 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 PSG9Q00887 426 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 CATR1Q13166 79 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 GABRA6Q16445 453 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 FAM106AQ4KMX7 169 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 C10orf55Q5SWW7 151 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 TCTEX1D1Q8N7M0 179 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 CT55Q8WUE5 264 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 BLNKQ8WV28 456 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 RTL8AQ9BWD3 113 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 FNDC4Q9H6D8 234 aaPredicted RBP4.42□□□□□ -1.7
ATG4A-204ENST00000372246 DUSP13Q9UII6 198 aa4.42□□□□□ -1.7
ATG4A-204ENST00000372246 TRAV9-2A0A087WT02 112 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 TRGV10A0A0A0MS01 117 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 RNF212BA8MTL3 300 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 HIGD1CA8MV81 97 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 NPIPB11E5RHQ5 1161 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 MMP23AO75900 390 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 NCR2O95944 276 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 REG1AP05451 166 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 SP1P08047 785 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 SCGB1A1P11684 91 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 FOLR3P41439 243 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 CYB561P49447 251 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 UBE2G1P62253 170 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 OR1C1Q15619 314 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 TIGITQ495A1 244 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 FAM120AOSQ5T036 256 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 TEPPQ6URK8 271 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 MUC15Q8N387 334 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 DEFB108BQ8NET1 73 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 OR8B3Q8NGG8 313 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 RAB37Q96AX2 223 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 CHRDL1Q9BU40 450 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 MEGF9Q9H1U4 602 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 PLEKHA3Q9HB20 300 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 TRAV8-1A0A0A6YYK1 113 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 OR5B21A6NL26 309 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms