RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CFHR1Q03591 330 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 KLF17Q5JT82 389 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 MGAMO43451 1857 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 FOXI3A8MTJ6 420 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 PCSK4Q6UW60 755 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 CHAC1Q9BUX1 264 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 PRSS53Q2L4Q9 553 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 Q6ZT83 130 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 RAMP3O60896 148 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 UNC119Q13432 240 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 LCTP09848 1927 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 CEP290O15078 2479 aa11.83□□□□□ -0.51
RAPGEF1-202ENST00000372190 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 PPBPP02775 128 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 SLC25A47Q6Q0C1 308 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 CTHRC1Q96CG8 243 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 MARS2Q96GW9 593 aaKnown RBP11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 JPT2Q9H910 190 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 ASPHD2Q6ICH7 369 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 AQP3Q92482 292 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 SLC25A38Q96DW6 304 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 UBL5Q9BZL1 73 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 PRR32B1ATL7 298 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 C9JCJ5 164 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 F8WEM9 126 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 CDKN1BP46527 198 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 RPL8P62917 257 aaKnown RBP11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 A0A1W2PRE2 83 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 PLEKHB2Q96CS7 222 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 C1QTNF4Q9BXJ3 329 aa11.83□□□□□ -0.52
RAPGEF1-202ENST00000372190 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 SUMO4Q6EEV6 95 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 K7EP13 123 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 REG1BP48304 166 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 SYNJ2BPP57105 145 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 Q5BKY6 102 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 GLRX5Q86SX6 157 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 FGFRL1Q8N441 504 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 ZNF625Q96I27 306 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 FOXH1O75593 365 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 CD5P06127 495 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 COX5BP10606 129 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 IGKV3D-20A0A0C4DH25 116 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 IMMP1LQ96LU5 166 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
RAPGEF1-202ENST00000372190 ZNF146Q15072 292 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 GTSCR1Q86UQ5 136 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 OR5P3Q8WZ94 311 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 A0A1W2PPE3 182 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 KNCNA6PVL3 124 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 NPSP0C0P6 89 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 KLF14Q8TD94 323 aaPredicted RBP11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 RNASE6Q93091 150 aaKnown RBP11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 KCNK17Q96T54 332 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 SELLP14151 372 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 SLAQ13239 276 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 FAM231BA6NCW3 169 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 LINC00158P58513 81 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 PYY3Q5JQD4 70 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 ZNF664Q8N3J9 261 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 FAM90A2PQ658T7 463 aa11.81□□□□□ -0.52
RAPGEF1-202ENST00000372190 PTPRFP10586 1907 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 PDCD11Q14690 1871 aaKnown RBP11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 TRBV5-7A0A0A0MS05 114 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 ZG16O60844 167 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 GFI1BQ5VTD9 330 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 FAM168AQ92567 244 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 TMEM242Q9NWH2 141 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 ANAPC10Q9UM13 185 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 MSRB2Q9Y3D2 182 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 ZNF818PQ6ZRF7 136 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 IL6RP08887 468 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 ZNF708P17019 499 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 BSPH1Q075Z2 132 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 HCP5Q6MZN7 132 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 LINC00305Q7Z4B0 112 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 DUX4L9Q6RFH8 374 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 ZNF826PQ6ZT77 177 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 BRK1Q8WUW1 75 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 OSTCQ9NRP0 149 aa11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 ZFC3H1O60293 1989 aaKnown RBP11.8□□□□□ -0.52
RAPGEF1-202ENST00000372190 TRBV24-1A0A075B6N3 115 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 ICAM4Q14773 271 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 HOXD3P31249 432 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 C1orf100Q5SVJ3 147 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 NEU4Q8WWR8 484 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 ZSWIM8A7E2V4 1837 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 C9orf118A6NHY6 69 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 COLCA2A8K830 154 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 A8MWP6 167 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 CGAP01215 116 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 LY6EQ16553 131 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 IGHV3OR16-10A0A075B7F0 116 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 TMEM187Q14656 261 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 CRIM1Q9NZV1 1036 aa11.79□□□□□ -0.52
RAPGEF1-202ENST00000372190 LAIR2Q6ISS4 152 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 GCSAMQ8N6F7 178 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 ATP5G3P48201 142 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms