RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 A0A1W2PQD3 144 aa12.97□□□□□ -0.33
GTF3C4-201ENST00000372146 NHSQ6T4R5 1651 aa12.97□□□□□ -0.33
GTF3C4-201ENST00000372146 RASL10BQ96S79 203 aa12.97□□□□□ -0.33
GTF3C4-201ENST00000372146 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
GTF3C4-201ENST00000372146 PRR7Q8TB68 274 aa12.97□□□□□ -0.33
GTF3C4-201ENST00000372146 IDI2-AS1Q9NZ38 188 aa12.97□□□□□ -0.33
GTF3C4-201ENST00000372146 MGST3O14880 152 aa12.97□□□□□ -0.33
GTF3C4-201ENST00000372146 DXOO77932 396 aaKnown RBP12.97□□□□□ -0.33
GTF3C4-201ENST00000372146 DCTN5Q9BTE1 182 aa12.97□□□□□ -0.33
GTF3C4-201ENST00000372146 F8WEM9 126 aa12.96□□□□□ -0.33
GTF3C4-201ENST00000372146 COL16A1Q07092 1604 aaPredicted RBP12.96□□□□□ -0.33
GTF3C4-201ENST00000372146 MIR17HGQ75NE6 70 aa12.96□□□□□ -0.33
GTF3C4-201ENST00000372146 RASL11AQ6T310 242 aa12.96□□□□□ -0.33
GTF3C4-201ENST00000372146 SF3B6Q9Y3B4 125 aaKnown RBP12.96□□□□□ -0.33
GTF3C4-201ENST00000372146 COL22A1Q8NFW1 1626 aaPredicted RBP12.96□□□□□ -0.33
GTF3C4-201ENST00000372146 SIPA1L1O43166 1804 aa12.96□□□□□ -0.34
GTF3C4-201ENST00000372146 TRBV5-5A0A0J9YX44 114 aa12.96□□□□□ -0.34
GTF3C4-201ENST00000372146 CXCL1P09341 107 aa12.96□□□□□ -0.34
GTF3C4-201ENST00000372146 ZNF71Q9NQZ8 489 aaPredicted RBP12.96□□□□□ -0.34
GTF3C4-201ENST00000372146 MS4A5Q9H3V2 200 aa12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 TMEM131Q92545 1883 aa12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 TICRRQ7Z2Z1 1910 aa12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 C8orf82Q6P1X6 216 aaPredicted RBP12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 KLF17Q5JT82 389 aaPredicted RBP12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 ZNF826PQ6ZT77 177 aa12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 OR5P3Q8WZ94 311 aa12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 LY6EQ16553 131 aa12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 SMPXQ9UHP9 88 aa12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 ZXDCQ2QGD7 858 aaPredicted RBP12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 GLMPQ8WWB7 406 aa12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 MSGN1A6NI15 193 aa12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 TCTEX1D4Q5JR98 221 aa12.95□□□□□ -0.34
GTF3C4-201ENST00000372146 CLPSL1A2RUU4 121 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 Q6ZNB5 142 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 FOXD3Q9UJU5 478 aaPredicted RBP12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 CCL1P22362 96 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 RPL39P5Q59GN2 51 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 AGRNO00468 2067 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 UCP2P55851 309 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 C9orf50Q5SZB4 431 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 WFDC12Q8WWY7 111 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 VGLL1Q99990 258 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 TMEM144Q7Z5S9 345 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 ADARB2-AS1A8MUL3 147 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 DRD3P35462 400 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 CLEC2AQ6UVW9 174 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 SPTY2D1-AS1A0A0U1RR47 76 aa12.94□□□□□ -0.34
GTF3C4-201ENST00000372146 DLL3Q9NYJ7 618 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 IGLV3-16A0A075B6K0 115 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 PPP1R27Q86WC6 154 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 Q96M66 194 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 PPBPP02775 128 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 RPL34P49207 117 aaKnown RBP12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 LCN12Q6JVE5 192 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 C1orf174Q8IYL3 243 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 NBASA2RRP1 2371 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 LIFP15018 202 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 PSG4Q00888 419 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 POU2AF1Q16633 256 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 ASPHD2Q6ICH7 369 aa12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 SRSF8Q9BRL6 282 aaKnown RBP12.93□□□□□ -0.34
GTF3C4-201ENST00000372146 TNRC6CQ9HCJ0 1690 aaKnown RBP12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 HTN3P15516 51 aa12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 SCARF2Q96GP6 870 aaPredicted RBP12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 ACACAQ13085 2346 aa12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 D6R8Y8 96 aa12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 FXYD7P58549 80 aa12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 TMEM240Q5SV17 173 aa12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 GAGE12HA6NDE8 117 aa12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 CCL20P78556 96 aa12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 COL18A1P39060 1754 aa12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 CFHR5Q9BXR6 569 aa12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 C1QAP02745 245 aa12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 DUTP33316 252 aaKnown RBP12.92□□□□□ -0.34
GTF3C4-201ENST00000372146 F8W1H4 67 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 NPSP0C0P6 89 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 OR9G9P0C7N8 305 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 PTGDSP41222 190 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 TNRC6BQ9UPQ9 1833 aaKnown RBP12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM231BA6NCW3 169 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 CD5P06127 495 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 ASCL2Q99929 193 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 CCL3P10147 92 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 PRB1P04280 392 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 LINC01559Q495D7 138 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 SHISA5Q8N114 240 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 ZNF664Q8N3J9 261 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 IGHV3OR16-8A0A075B7F1 116 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A10PA6NDY2 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A18PA6NE21 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A16PA6NEW6 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A20PA6NIJ5 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A8PA6NJQ4 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A7PA6NKC0 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A22PA8MWA6 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A12PA8MX19 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A5PA8MXJ8 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A23PA8MXZ1 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A15PP0C7V4 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A13PP0C7W8 464 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms