RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 PPIAL4CA0A0B4J2A2 164 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 C7orf71A4D174 169 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 PPIAL4DF5H284 164 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 PPIAL4FP0DN26 164 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 RAB31Q13636 194 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 Q8IYB0 196 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 C5orf17Q8NAS9 161 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 SMRP1Q8NCR6 262 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 OR4S2Q8NH73 311 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 LOXL2Q9Y4K0 774 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 DSCAMO60469 2012 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 A0A096LNJ9 63 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 A0A1W2PRE2 83 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 CCL4P13236 92 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 SPINK14Q6IE38 97 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 ACP7Q6ZNF0 438 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 SGK494Q96LW2 274 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 RTL8AQ9BWD3 113 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 ZNF331Q9NQX6 463 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 PATE2Q6UY27 113 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 OR4A16Q8NH70 328 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 SVIPQ8NHG7 77 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 H1FXQ92522 213 aaKnown RBP9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 LEAP2Q969E1 77 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 GRAMD2BQ96HH9 432 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 POLDIP2Q9Y2S7 368 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 RAI1Q7Z5J4 1906 aaPredicted RBP9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 TANC2Q9HCD6 1990 aa9.46□□□□□ -0.89
SMARCA1-201ENST00000371121 SRRM4A7MD48 611 aaKnown RBP9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 GNG5P63218 68 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 LINC01545Q5VT33 79 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 NINJ1Q92982 152 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 MLST8Q9BVC4 326 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 PRSS22Q9GZN4 317 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 DCHS2Q6V1P9 2916 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 ADGRG4Q8IZF6 3080 aa9.46□□□□□ -0.9
SMARCA1-201ENST00000371121 M0R1X1 148 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 FAM106CPP0CH98 169 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 SMIM21Q3B7S5 101 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 FAM106AQ4KMX7 169 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 PRSS57Q6UWY2 283 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 WDR82Q6UXN9 313 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 DUSP13Q9UII6 198 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 FOXA2Q9Y261 457 aaPredicted RBP9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 E7EUB6 86 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 OR7C2O60412 319 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 CIDEAO60543 219 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 HIST1H1AQ02539 215 aaPredicted RBP9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 TRAT1Q6PIZ9 186 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 SMIM12Q96EX1 92 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 TMEM167BQ9NRX6 74 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 NAV3Q8IVL0 2385 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 CYC1P08574 325 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 SP9P0CG40 484 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 COX8AP10176 69 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 PAX2Q02962 417 aa9.45□□□□□ -0.9
SMARCA1-201ENST00000371121 ATMQ13315 3056 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 K7ERU9 68 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 GPR183P32249 361 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 PPP1R32Q7Z5V6 425 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 OR1N2Q8NGR9 330 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 PRR7Q8TB68 274 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 ZNF430Q9H8G1 570 aaPredicted RBP9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 C12orf54Q6X4T0 127 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 NEU4Q8WWR8 484 aaPredicted RBP9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 SRFP11831 508 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 GABRA6Q16445 453 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 SPRNQ5BIV9 151 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 ITLN1Q8WWA0 313 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 FXYD5Q96DB9 178 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 GCM1Q9NP62 436 aa9.44□□□□□ -0.9
SMARCA1-201ENST00000371121 C19orf71A6NCJ1 209 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 MGST3O14880 152 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 LEPROTL1O95214 131 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 MT-CO2P00403 227 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 MRPL49Q13405 166 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 OR4A5Q8NH83 315 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 MRPL36Q9P0J6 103 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 PEF1Q9UBV8 284 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 IQCF6A8MYZ5 107 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 GPR12P47775 334 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 ADAMTSL5Q6ZMM2 481 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 CHRDL1Q9BU40 450 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 AMMECR1Q9Y4X0 333 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 IGKV1D-37A0A075B6S9 117 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 CD46P15529 392 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 LOXL1Q08397 574 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 CR1LQ2VPA4 569 aa9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 CHCHD1Q96BP2 118 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-201ENST00000371121 IGKV1D-17A0A075B6S4 117 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 HSBP1L1C9JCN9 74 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 IGKV1-16P04430 117 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 APOBEC3AP31941 199 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 C16orf54Q6UWD8 224 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 OR10W1Q8NGF6 305 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 TRIB1Q96RU8 372 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 C12orf49Q9H741 205 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 ZNRD1Q9P1U0 126 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 RABAC1Q9UI14 185 aa9.42□□□□□ -0.9
SMARCA1-201ENST00000371121 C9orf118A6NHY6 69 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 350.1 ms