RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 PALMDQ9NP74 551 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 GSKIPQ9P0R6 139 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 PAIP2BQ9ULR5 123 aaKnown RBP11.34□□□□□ -0.59
COL9A1-204ENST00000370496 F8W735 103 aaPredicted RBP11.33□□□□□ -0.6
COL9A1-204ENST00000370496 WIPF1O43516 503 aa11.33□□□□□ -0.6
COL9A1-204ENST00000370496 SSSCA1O60232 199 aa11.33□□□□□ -0.6
COL9A1-204ENST00000370496 FCGR2BP31994 310 aaPredicted RBP11.33□□□□□ -0.6
COL9A1-204ENST00000370496 NPBWR1P48145 328 aa11.33□□□□□ -0.6
COL9A1-204ENST00000370496 REC114Q7Z4M0 266 aa11.33□□□□□ -0.6
COL9A1-204ENST00000370496 GPHB5Q86YW7 130 aa11.33□□□□□ -0.6
COL9A1-204ENST00000370496 ZBTB8BQ8NAP8 495 aaPredicted RBP11.33□□□□□ -0.6
COL9A1-204ENST00000370496 OR4D5Q8NGN0 318 aa11.33□□□□□ -0.6
COL9A1-204ENST00000370496 MARVELD1Q9BSK0 173 aa11.33□□□□□ -0.6
COL9A1-204ENST00000370496 ZMAT5Q9UDW3 170 aaKnown RBP11.33□□□□□ -0.6
COL9A1-204ENST00000370496 LY86O95711 162 aa11.32□□□□□ -0.6
COL9A1-204ENST00000370496 IFNA4P05014 189 aa11.32□□□□□ -0.6
COL9A1-204ENST00000370496 POLR2GP62487 172 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL9A1-204ENST00000370496 RAB11AP62491 216 aa11.32□□□□□ -0.6
COL9A1-204ENST00000370496 RPP30P78346 268 aaKnown RBP11.32□□□□□ -0.6
COL9A1-204ENST00000370496 RELQ04864 619 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-204ENST00000370496 ETFRF1Q6IPR1 90 aa11.32□□□□□ -0.6
COL9A1-204ENST00000370496 GSG1LQ6UXU4 331 aa11.32□□□□□ -0.6
COL9A1-204ENST00000370496 TMEM170AQ8WVE7 144 aa11.32□□□□□ -0.6
COL9A1-204ENST00000370496 CHRDL1Q9BU40 450 aa11.32□□□□□ -0.6
COL9A1-204ENST00000370496 FNDC4Q9H6D8 234 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-204ENST00000370496 SNRPGP15A8MWD9 76 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 A8MWP6 167 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 H3BP45 60 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 LGALS9O00182 355 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 PRB2P02812 416 aaPredicted RBP11.31□□□□□ -0.6
COL9A1-204ENST00000370496 SLC25A4P12235 298 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 SPNP16150 400 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 ADMP35318 185 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 ATP5IP56385 69 aaPredicted RBP11.31□□□□□ -0.6
COL9A1-204ENST00000370496 EGFEM1PQ0D2K5 195 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 SLC16A13Q7RTY0 426 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 HAPLN4Q86UW8 402 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 DYNLRB2Q8TF09 96 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 TMEM190Q8WZ59 177 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 MEGF8Q7Z7M0 2845 aa11.31□□□□□ -0.6
COL9A1-204ENST00000370496 C15orf62A8K5M9 175 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 NDUFA4O00483 81 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 GOSR2O14653 212 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 RND2P52198 227 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 KRTAP10-11P60412 298 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 ID3Q02535 119 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 DCTN2Q13561 401 aaKnown RBP11.3□□□□□ -0.6
COL9A1-204ENST00000370496 SPANXN5Q5MJ07 72 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 UNQ9165/PRO28630Q6UXU0 137 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 OR4X1Q8NH49 305 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 ACY3Q96HD9 319 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 C20orf24Q9BUV8 137 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 ZNF436Q9C0F3 470 aaPredicted RBP11.3□□□□□ -0.6
COL9A1-204ENST00000370496 AURKAIP1Q9NWT8 199 aaPredicted RBP11.3□□□□□ -0.6
COL9A1-204ENST00000370496 UFC1Q9Y3C8 167 aa11.3□□□□□ -0.6
COL9A1-204ENST00000370496 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
COL9A1-204ENST00000370496 C2orf70A6NJV1 201 aa11.29□□□□□ -0.6
COL9A1-204ENST00000370496 SSNA1O43805 119 aa11.29□□□□□ -0.6
COL9A1-204ENST00000370496 CLN5O75503 358 aa11.29□□□□□ -0.6
COL9A1-204ENST00000370496 YIF1AO95070 293 aa11.29□□□□□ -0.6
COL9A1-204ENST00000370496 CSN3P07498 182 aa11.29□□□□□ -0.6
COL9A1-204ENST00000370496 CTSGP08311 255 aa11.29□□□□□ -0.6
COL9A1-204ENST00000370496 CACNG8Q8WXS5 425 aa11.29□□□□□ -0.6
COL9A1-204ENST00000370496 SLC35E1Q96K37 410 aa11.29□□□□□ -0.6
COL9A1-204ENST00000370496 C2orf50Q96LR7 162 aa11.29□□□□□ -0.6
COL9A1-204ENST00000370496 PSENENQ9NZ42 101 aa11.29□□□□□ -0.6
COL9A1-204ENST00000370496 MRPL36Q9P0J6 103 aaKnown RBP11.29□□□□□ -0.6
COL9A1-204ENST00000370496 IGHV3OR16-8A0A075B7F1 116 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 TMEM213A2RRL7 107 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 L7N2F9 121 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 MBPP02686 304 aaPredicted RBP11.28□□□□□ -0.6
COL9A1-204ENST00000370496 S100A10P60903 97 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 VAMP2P63027 116 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 CD69Q07108 199 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 MLANAQ16655 118 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 PRSS54Q6PEW0 395 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 IL34Q6ZMJ4 242 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 RAB40CQ96S21 281 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 DAZ1Q9NQZ3 744 aaKnown RBP11.28□□□□□ -0.6
COL9A1-204ENST00000370496 SIGLEC8Q9NYZ4 499 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
COL9A1-204ENST00000370496 RCL1Q9Y2P8 373 aaKnown RBP11.28□□□□□ -0.6
COL9A1-204ENST00000370496 LSM5Q9Y4Y9 91 aaKnown RBP11.28□□□□□ -0.6
COL9A1-204ENST00000370496 IGLV1-51P01701 117 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 FOLR2P14207 255 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 EDN2P20800 178 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 RGS21Q2M5E4 152 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 TM4SF20Q53R12 229 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 ZNF600Q6ZNG1 722 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 OR1S2Q8NGQ3 325 aa11.28□□□□□ -0.6
COL9A1-204ENST00000370496 TRAV30A0A087WSZ9 112 aa11.27□□□□□ -0.61
COL9A1-204ENST00000370496 TMEM50AO95807 157 aa11.27□□□□□ -0.61
COL9A1-204ENST00000370496 OR10J1P30954 320 aa11.27□□□□□ -0.61
COL9A1-204ENST00000370496 ELLP55199 621 aaPredicted RBP11.27□□□□□ -0.61
COL9A1-204ENST00000370496 TIGITQ495A1 244 aa11.27□□□□□ -0.61
COL9A1-204ENST00000370496 LCN12Q6JVE5 192 aa11.27□□□□□ -0.61
COL9A1-204ENST00000370496 TMEM116Q8NCL8 245 aa11.27□□□□□ -0.61
COL9A1-204ENST00000370496 NPIPB3Q92617 1050 aa11.27□□□□□ -0.61
COL9A1-204ENST00000370496 MARC2Q969Z3 335 aa11.27□□□□□ -0.61
COL9A1-204ENST00000370496 SMIM8Q96KF7 97 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms