RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 A0A1W2PS18 150 aa11.94□□□□□ -0.5
VMA21-202ENST00000370361 DISC1C4P0D8 188 aa11.94□□□□□ -0.5
VMA21-202ENST00000370361 ZNF207O43670 478 aaKnown RBP11.94□□□□□ -0.5
VMA21-202ENST00000370361 UCP1P25874 307 aa11.94□□□□□ -0.5
VMA21-202ENST00000370361 SURF2Q15527 256 aaPredicted RBP11.94□□□□□ -0.5
VMA21-202ENST00000370361 TRIM16LQ309B1 348 aa11.94□□□□□ -0.5
VMA21-202ENST00000370361 FAM90A2PQ658T7 463 aa11.94□□□□□ -0.5
VMA21-202ENST00000370361 CSTL1Q9H114 145 aa11.94□□□□□ -0.5
VMA21-202ENST00000370361 VSIRQ9H7M9 311 aa11.94□□□□□ -0.5
VMA21-202ENST00000370361 IGHV3OR16-8A0A075B7F1 116 aa11.93□□□□□ -0.5
VMA21-202ENST00000370361 A0A0B4J293 547 aa11.93□□□□□ -0.5
VMA21-202ENST00000370361 MPTX1A8MV57 137 aa11.93□□□□□ -0.5
VMA21-202ENST00000370361 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
VMA21-202ENST00000370361 IGKV1-5P01602 117 aa11.93□□□□□ -0.5
VMA21-202ENST00000370361 HOXA1P49639 335 aaPredicted RBP11.93□□□□□ -0.5
VMA21-202ENST00000370361 OR52E5Q8NH55 327 aa11.93□□□□□ -0.5
VMA21-202ENST00000370361 RNASE11Q8TAA1 199 aaKnown RBP11.93□□□□□ -0.5
VMA21-202ENST00000370361 RTBDNQ9BSG5 229 aaPredicted RBP11.93□□□□□ -0.5
VMA21-202ENST00000370361 DNAH1Q9P2D7 4330 aa11.93□□□□□ -0.5
VMA21-202ENST00000370361 TRAV30A0A087WSZ9 112 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 RPS10-NUDT3A0A1W2PQS6 291 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 AARDQ4LEZ3 155 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 CEMP1Q6PRD7 247 aaPredicted RBP11.92□□□□□ -0.5
VMA21-202ENST00000370361 TOMM20LQ6UXN7 152 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 TCF24Q7RTU0 167 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 OR51S1Q8NGJ8 323 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 LINC00476Q8WZB0 136 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 NARS2Q96I59 477 aaKnown RBP11.92□□□□□ -0.5
VMA21-202ENST00000370361 ZNF414Q96IQ9 312 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 PRRT1Q99946 306 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 GPR132Q9UNW8 380 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 C14orf166Q9Y224 244 aaKnown RBP11.92□□□□□ -0.5
VMA21-202ENST00000370361 V9GYH0 126 aa11.92□□□□□ -0.5
VMA21-202ENST00000370361 DNASE2O00115 360 aaPredicted RBP11.91□□□□□ -0.5
VMA21-202ENST00000370361 TMEM50AO95807 157 aa11.91□□□□□ -0.5
VMA21-202ENST00000370361 RPL35AP18077 110 aaKnown RBP11.91□□□□□ -0.5
VMA21-202ENST00000370361 EIF2B2P49770 351 aaKnown RBP11.91□□□□□ -0.5
VMA21-202ENST00000370361 SPCS3P61009 180 aa11.91□□□□□ -0.5
VMA21-202ENST00000370361 DHODHQ02127 395 aa11.91□□□□□ -0.5
VMA21-202ENST00000370361 SP6Q3SY56 376 aa11.91□□□□□ -0.5
VMA21-202ENST00000370361 TMEM41BQ5BJD5 291 aa11.91□□□□□ -0.5
VMA21-202ENST00000370361 OR4X1Q8NH49 305 aa11.91□□□□□ -0.5
VMA21-202ENST00000370361 TRIM63Q969Q1 353 aa11.91□□□□□ -0.5
VMA21-202ENST00000370361 MFFQ9GZY8 342 aa11.91□□□□□ -0.5
VMA21-202ENST00000370361 TMEM222Q9H0R3 208 aa11.91□□□□□ -0.5
VMA21-202ENST00000370361 PUS1Q9Y606 427 aaKnown RBP eCLIP11.91□□□□□ -0.5
VMA21-202ENST00000370361 PIGBOS1A0A0B4J2F0 54 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 CLN5O75503 358 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 CDS2O95674 445 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 RNASE2P10153 161 aaKnown RBP11.9□□□□□ -0.5
VMA21-202ENST00000370361 NPPCP23582 126 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 S100A5P33763 92 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 OPRK1P41145 380 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 HTR2BP41595 481 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 ZNF79Q15937 498 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 IZUMO4Q1ZYL8 232 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 BSXQ3C1V8 233 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 CCDC190Q86UF4 302 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 NOXA1Q86UR1 476 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 RBPMSQ93062 196 aaKnown RBP11.9□□□□□ -0.5
VMA21-202ENST00000370361 METTL26Q96S19 204 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 C11orf68Q9H3H3 251 aaKnown RBP11.9□□□□□ -0.5
VMA21-202ENST00000370361 ZFAND3Q9H8U3 227 aa11.9□□□□□ -0.5
VMA21-202ENST00000370361 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.9□□□□□ -0.5
VMA21-202ENST00000370361 PMS2P11Q13670 270 aa11.89□□□□□ -0.51
VMA21-202ENST00000370361 APRG1Q8IVJ8 170 aa11.89□□□□□ -0.51
VMA21-202ENST00000370361 RNASEH2CQ8TDP1 164 aaKnown RBP11.89□□□□□ -0.51
VMA21-202ENST00000370361 GLYATL2Q8WU03 294 aa11.89□□□□□ -0.51
VMA21-202ENST00000370361 ST8SIA2Q92186 375 aa11.89□□□□□ -0.51
VMA21-202ENST00000370361 GRAMD2BQ96HH9 432 aa11.89□□□□□ -0.51
VMA21-202ENST00000370361 MS4A6AQ9H2W1 248 aa11.89□□□□□ -0.51
VMA21-202ENST00000370361 SCP2D1Q9UJQ7 156 aa11.89□□□□□ -0.51
VMA21-202ENST00000370361 IGHV3-49A0A0A0MS15 119 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 TEX13DA0A0J9YY54 714 aaPredicted RBP11.88□□□□□ -0.51
VMA21-202ENST00000370361 CRYM-AS1A6NIL9 109 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 IGHV3-48P01763 117 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 OR5AC1P0C628 307 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 SLC25A4P12235 298 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 CRYBB3P26998 211 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 ETV6P41212 452 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 TFPI2P48307 235 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 KLF9Q13886 244 aaPredicted RBP11.88□□□□□ -0.51
VMA21-202ENST00000370361 PYDC2Q56P42 97 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 SPINK9Q5DT21 86 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 SCGB3A2Q96PL1 93 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 RARRES2Q99969 163 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 NAA60Q9H7X0 242 aa11.88□□□□□ -0.51
VMA21-202ENST00000370361 A0A0G2JRQ6 117 aa11.87□□□□□ -0.51
VMA21-202ENST00000370361 RPL11P62913 178 aaKnown RBP11.87□□□□□ -0.51
VMA21-202ENST00000370361 ETFRF1Q6IPR1 90 aa11.87□□□□□ -0.51
VMA21-202ENST00000370361 OR1S2Q8NGQ3 325 aa11.87□□□□□ -0.51
VMA21-202ENST00000370361 LHFPL5Q8TAF8 219 aa11.87□□□□□ -0.51
VMA21-202ENST00000370361 IL22RA2Q969J5 263 aa11.87□□□□□ -0.51
VMA21-202ENST00000370361 MCUBQ9NWR8 336 aa11.87□□□□□ -0.51
VMA21-202ENST00000370361 IGKV3-7A0A075B6H7 116 aa11.86□□□□□ -0.51
VMA21-202ENST00000370361 FAUP35544 74 aaKnown RBP11.86□□□□□ -0.51
VMA21-202ENST00000370361 AP2S1P53680 142 aaPredicted RBP11.86□□□□□ -0.51
VMA21-202ENST00000370361 TCTAP57738 103 aa11.86□□□□□ -0.51
VMA21-202ENST00000370361 AP3S2P59780 193 aa11.86□□□□□ -0.51
VMA21-202ENST00000370361 TMEM187Q14656 261 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms