RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 TMEM50AO95807 157 aa15.35■□□□□ 0.05
SMNDC1-201ENST00000369592 SULT1A3P0DMM9 295 aa15.35■□□□□ 0.05
SMNDC1-201ENST00000369592 SULT1A4P0DMN0 295 aa15.35■□□□□ 0.05
SMNDC1-201ENST00000369592 MLANAQ16655 118 aa15.35■□□□□ 0.05
SMNDC1-201ENST00000369592 C2orf83Q53S99 150 aa15.35■□□□□ 0.05
SMNDC1-201ENST00000369592 LRTM2Q8N967 370 aa15.35■□□□□ 0.05
SMNDC1-201ENST00000369592 DUSP18Q8NEJ0 188 aa15.35■□□□□ 0.05
SMNDC1-201ENST00000369592 HSPB7Q9UBY9 170 aa15.35■□□□□ 0.05
SMNDC1-201ENST00000369592 GNG7O60262 68 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 SCAF4O95104 1147 aaKnown RBP15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 HTR2BP41595 481 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 NPBWR1P48145 328 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 CCR6P51684 374 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 SRPXP78539 464 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 LGI3Q8N145 548 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 OR4X1Q8NH49 305 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 SPAG8Q99932 426 aaPredicted RBP15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 C20orf24Q9BUV8 137 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 TUBA4BQ9H853 241 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 ZMAT4Q9H898 229 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 ZFAND3Q9H8U3 227 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 ENY2Q9NPA8 101 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 CACFD1Q9UGQ2 172 aa15.34■□□□□ 0.05
SMNDC1-201ENST00000369592 IGHV7-4-1A0A0J9YVY3 117 aa15.33■□□□□ 0.04
SMNDC1-201ENST00000369592 CHEK1O14757 476 aa15.33■□□□□ 0.04
SMNDC1-201ENST00000369592 ZNF207O43670 478 aaKnown RBP15.33■□□□□ 0.04
SMNDC1-201ENST00000369592 PITX3O75364 302 aa15.33■□□□□ 0.04
SMNDC1-201ENST00000369592 ANKRD55Q3KP44 614 aa15.33■□□□□ 0.04
SMNDC1-201ENST00000369592 TOMM20LQ6UXN7 152 aa15.33■□□□□ 0.04
SMNDC1-201ENST00000369592 DUXBA0A1W2PPF3 345 aa15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 CLN5O75503 358 aa15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 ANXA3P12429 323 aa15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 TNFRSF9Q07011 255 aa15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 SMCO1Q147U7 214 aa15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 FAM90A2PQ658T7 463 aa15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 RBPMS2Q6ZRY4 209 aaKnown RBP15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 SLC16A13Q7RTY0 426 aa15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 TMED4Q7Z7H5 227 aa15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 OR52B4Q8NGK2 314 aa15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 HEYLQ9NQ87 328 aaPredicted RBP15.32■□□□□ 0.04
SMNDC1-201ENST00000369592 A0A1B0GU03 582 aa15.31■□□□□ 0.04
SMNDC1-201ENST00000369592 IGKV1-17P01599 117 aa15.31■□□□□ 0.04
SMNDC1-201ENST00000369592 ZNF600Q6ZNG1 722 aa15.31■□□□□ 0.04
SMNDC1-201ENST00000369592 RNASEH2CQ8TDP1 164 aaKnown RBP15.31■□□□□ 0.04
SMNDC1-201ENST00000369592 CITED4Q96RK1 184 aa15.31■□□□□ 0.04
SMNDC1-201ENST00000369592 SPATA25Q9BR10 227 aa15.31■□□□□ 0.04
SMNDC1-201ENST00000369592 HIPK2Q9H2X6 1198 aa15.31■□□□□ 0.04
SMNDC1-201ENST00000369592 SRD5A3Q9H8P0 318 aa15.31■□□□□ 0.04
SMNDC1-201ENST00000369592 CEBPZOSA8MTT3 80 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 SFT2D2O95562 160 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 BTCP35070 178 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 OPRK1P41145 380 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 PPP1R1AQ13522 171 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 TMEM116Q8NCL8 245 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 SLC24A4Q8NFF2 622 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 RNF2Q99496 336 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 RHPN1-AS1Q9BWJ2 59 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 VSIRQ9H7M9 311 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 EDA2RQ9HAV5 297 aa15.3■□□□□ 0.04
SMNDC1-201ENST00000369592 TRAV14DV4A0A0A6YYC5 116 aa15.29■□□□□ 0.04
SMNDC1-201ENST00000369592 PIGBOS1A0A0B4J2F0 54 aa15.29■□□□□ 0.04
SMNDC1-201ENST00000369592 NAP1L6A6NFF2 107 aa15.29■□□□□ 0.04
SMNDC1-201ENST00000369592 SLC25A6P12236 298 aa15.29■□□□□ 0.04
SMNDC1-201ENST00000369592 UBE2MP61081 183 aaKnown RBP15.29■□□□□ 0.04
SMNDC1-201ENST00000369592 RBMS2Q15434 407 aaKnown RBP15.29■□□□□ 0.04
SMNDC1-201ENST00000369592 LAMTOR1Q6IAA8 161 aa15.29■□□□□ 0.04
SMNDC1-201ENST00000369592 PRSS54Q6PEW0 395 aa15.29■□□□□ 0.04
SMNDC1-201ENST00000369592 FAM110AQ9BQ89 295 aa15.29■□□□□ 0.04
SMNDC1-201ENST00000369592 PUS1Q9Y606 427 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMNDC1-201ENST00000369592 YIF1AO95070 293 aa15.28■□□□□ 0.04
SMNDC1-201ENST00000369592 NDUFB6O95139 128 aa15.28■□□□□ 0.04
SMNDC1-201ENST00000369592 ODF3L2Q3SX64 289 aa15.28■□□□□ 0.04
SMNDC1-201ENST00000369592 CENPSQ8N2Z9 138 aa15.28■□□□□ 0.04
SMNDC1-201ENST00000369592 LILRB2Q8N423 598 aa15.28■□□□□ 0.04
SMNDC1-201ENST00000369592 RBKSQ9H477 322 aa15.28■□□□□ 0.04
SMNDC1-201ENST00000369592 NXPH3O95157 252 aa15.27■□□□□ 0.04
SMNDC1-201ENST00000369592 APOHP02749 345 aaPredicted RBP15.27■□□□□ 0.04
SMNDC1-201ENST00000369592 IGLC1P0CG04 106 aa15.27■□□□□ 0.04
SMNDC1-201ENST00000369592 SLC25A4P12235 298 aa15.27■□□□□ 0.04
SMNDC1-201ENST00000369592 NPY1RP25929 384 aa15.27■□□□□ 0.04
SMNDC1-201ENST00000369592 DTD1Q8TEA8 209 aa15.27■□□□□ 0.04
SMNDC1-201ENST00000369592 U3KQ87 197 aa15.27■□□□□ 0.04
SMNDC1-201ENST00000369592 CSMD3Q7Z407 3707 aa15.26■□□□□ 0.03
SMNDC1-201ENST00000369592 IGHV3-49A0A0A0MS15 119 aa15.26■□□□□ 0.03
SMNDC1-201ENST00000369592 RPS10-NUDT3A0A1W2PQS6 291 aa15.26■□□□□ 0.03
SMNDC1-201ENST00000369592 IL7P13232 177 aa15.26■□□□□ 0.03
SMNDC1-201ENST00000369592 VAMP1P23763 118 aa15.26■□□□□ 0.03
SMNDC1-201ENST00000369592 TRIQKQ629K1 86 aa15.26■□□□□ 0.03
SMNDC1-201ENST00000369592 ST8SIA2Q92186 375 aa15.26■□□□□ 0.03
SMNDC1-201ENST00000369592 GINS3Q9BRX5 216 aa15.26■□□□□ 0.03
SMNDC1-201ENST00000369592 TMED3Q9Y3Q3 217 aa15.26■□□□□ 0.03
SMNDC1-201ENST00000369592 TRAV30A0A087WSZ9 112 aa15.25■□□□□ 0.03
SMNDC1-201ENST00000369592 C3orf84H3BNL1 204 aa15.25■□□□□ 0.03
SMNDC1-201ENST00000369592 ATP5IP56385 69 aaPredicted RBP15.25■□□□□ 0.03
SMNDC1-201ENST00000369592 TIGITQ495A1 244 aa15.25■□□□□ 0.03
SMNDC1-201ENST00000369592 NOXA1Q86UR1 476 aa15.25■□□□□ 0.03
SMNDC1-201ENST00000369592 C7orf50Q9BRJ6 194 aaKnown RBP15.25■□□□□ 0.03
SMNDC1-201ENST00000369592 U3KQE9 123 aa15.25■□□□□ 0.03
SMNDC1-201ENST00000369592 C9orf170A2RU37 121 aa15.24■□□□□ 0.03
SMNDC1-201ENST00000369592 OR4C46A6NHA9 309 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms