RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ELLP55199 621 aaPredicted RBP16.95■□□□□ 0.3
ECHDC1-203ENST00000368291 IFITM3Q01628 133 aa16.95■□□□□ 0.3
ECHDC1-203ENST00000368291 UXS1Q8NBZ7 420 aa16.95■□□□□ 0.3
ECHDC1-203ENST00000368291 OR2K2Q8NGT1 345 aa16.95■□□□□ 0.3
ECHDC1-203ENST00000368291 DTD1Q8TEA8 209 aa16.95■□□□□ 0.3
ECHDC1-203ENST00000368291 HIPK2Q9H2X6 1198 aa16.95■□□□□ 0.3
ECHDC1-203ENST00000368291 MLXQ9UH92 298 aa16.95■□□□□ 0.3
ECHDC1-203ENST00000368291 MPTX1A8MV57 137 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 NUPL2O15504 423 aaKnown RBP16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 UPK1BO75841 260 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 OPRK1P41145 380 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 ASAH1Q13510 395 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 C4orf46Q504U0 113 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 LCN12Q6JVE5 192 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 Q8N1Y9 231 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 DUSP18Q8NEJ0 188 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 OR52B4Q8NGK2 314 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 PALMDQ9NP74 551 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 UFC1Q9Y3C8 167 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 SELENOKQ9Y6D0 94 aa16.94■□□□□ 0.3
ECHDC1-203ENST00000368291 IGHV3OR16-8A0A075B7F1 116 aa16.93■□□□□ 0.3
ECHDC1-203ENST00000368291 GNG7O60262 68 aa16.93■□□□□ 0.3
ECHDC1-203ENST00000368291 TMEM50AO95807 157 aa16.93■□□□□ 0.3
ECHDC1-203ENST00000368291 NPY1RP25929 384 aa16.93■□□□□ 0.3
ECHDC1-203ENST00000368291 DCTN2Q13561 401 aaKnown RBP16.93■□□□□ 0.3
ECHDC1-203ENST00000368291 DYNLRB2Q8TF09 96 aa16.93■□□□□ 0.3
ECHDC1-203ENST00000368291 TECRQ9NZ01 308 aaKnown RBP16.93■□□□□ 0.3
ECHDC1-203ENST00000368291 TRAV6A0A075B6T7 132 aa16.92■□□□□ 0.3
ECHDC1-203ENST00000368291 ZNF785A8K8V0 405 aa16.92■□□□□ 0.3
ECHDC1-203ENST00000368291 NPBWR1P48145 328 aa16.92■□□□□ 0.3
ECHDC1-203ENST00000368291 OR4X1Q8NH49 305 aa16.92■□□□□ 0.3
ECHDC1-203ENST00000368291 COQ8AQ8NI60 647 aa16.92■□□□□ 0.3
ECHDC1-203ENST00000368291 RNASEH2CQ8TDP1 164 aaKnown RBP16.92■□□□□ 0.3
ECHDC1-203ENST00000368291 NUDT15Q9NV35 164 aa16.92■□□□□ 0.3
ECHDC1-203ENST00000368291 MRPL27Q9P0M9 148 aaKnown RBP16.92■□□□□ 0.3
ECHDC1-203ENST00000368291 U3KQ87 197 aa16.92■□□□□ 0.3
ECHDC1-203ENST00000368291 FAM90A26D6RGX4 464 aa16.91■□□□□ 0.3
ECHDC1-203ENST00000368291 RELQ04864 619 aaPredicted RBP16.91■□□□□ 0.3
ECHDC1-203ENST00000368291 MITD1Q8WV92 249 aa16.91■□□□□ 0.3
ECHDC1-203ENST00000368291 MARC2Q969Z3 335 aa16.91■□□□□ 0.3
ECHDC1-203ENST00000368291 B9D2Q9BPU9 175 aa16.91■□□□□ 0.3
ECHDC1-203ENST00000368291 DAZ1Q9NQZ3 744 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-203ENST00000368291 SMAD5-AS1Q9Y6J3 95 aa16.91■□□□□ 0.3
ECHDC1-203ENST00000368291 K7EMT4 169 aa16.9■□□□□ 0.3
ECHDC1-203ENST00000368291 CLN5O75503 358 aa16.9■□□□□ 0.3
ECHDC1-203ENST00000368291 IFNA10P01566 189 aa16.9■□□□□ 0.3
ECHDC1-203ENST00000368291 BTNL8Q6UX41 500 aa16.9■□□□□ 0.3
ECHDC1-203ENST00000368291 OR10C1Q96KK4 312 aa16.9■□□□□ 0.3
ECHDC1-203ENST00000368291 C20orf24Q9BUV8 137 aa16.9■□□□□ 0.3
ECHDC1-203ENST00000368291 COL7A1Q02388 2944 aa16.9■□□□□ 0.3
ECHDC1-203ENST00000368291 FAM240BA0A1B0GVZ2 78 aa16.89■□□□□ 0.3
ECHDC1-203ENST00000368291 C15orf62A8K5M9 175 aa16.89■□□□□ 0.3
ECHDC1-203ENST00000368291 ZNF207O43670 478 aaKnown RBP16.89■□□□□ 0.3
ECHDC1-203ENST00000368291 PRSS54Q6PEW0 395 aa16.89■□□□□ 0.3
ECHDC1-203ENST00000368291 TMEM61Q8N0U2 210 aa16.89■□□□□ 0.3
ECHDC1-203ENST00000368291 WDR89Q96FK6 387 aaPredicted RBP16.89■□□□□ 0.3
ECHDC1-203ENST00000368291 RPS10-NUDT3A0A1W2PQS6 291 aa16.89■□□□□ 0.29
ECHDC1-203ENST00000368291 H2AFB2P0C5Z0 115 aa16.89■□□□□ 0.29
ECHDC1-203ENST00000368291 IAPPP10997 89 aa16.89■□□□□ 0.29
ECHDC1-203ENST00000368291 MZT2BQ6NZ67 158 aa16.89■□□□□ 0.29
ECHDC1-203ENST00000368291 NOXA1Q86UR1 476 aa16.89■□□□□ 0.29
ECHDC1-203ENST00000368291 MAGT1Q9H0U3 335 aa16.89■□□□□ 0.29
ECHDC1-203ENST00000368291 SYNGR2O43760 224 aa16.88■□□□□ 0.29
ECHDC1-203ENST00000368291 IGKV1-17P01599 117 aa16.88■□□□□ 0.29
ECHDC1-203ENST00000368291 TOMM20LQ6UXN7 152 aa16.88■□□□□ 0.29
ECHDC1-203ENST00000368291 TMEM116Q8NCL8 245 aa16.88■□□□□ 0.29
ECHDC1-203ENST00000368291 OR4D5Q8NGN0 318 aa16.88■□□□□ 0.29
ECHDC1-203ENST00000368291 SEC22CQ9BRL7 303 aa16.88■□□□□ 0.29
ECHDC1-203ENST00000368291 ZFAND3Q9H8U3 227 aa16.88■□□□□ 0.29
ECHDC1-203ENST00000368291 MED6O75586 246 aa16.87■□□□□ 0.29
ECHDC1-203ENST00000368291 SLC25A4P12235 298 aa16.87■□□□□ 0.29
ECHDC1-203ENST00000368291 RND2P52198 227 aa16.87■□□□□ 0.29
ECHDC1-203ENST00000368291 ID3Q02535 119 aa16.87■□□□□ 0.29
ECHDC1-203ENST00000368291 CD69Q07108 199 aa16.87■□□□□ 0.29
ECHDC1-203ENST00000368291 ZNF600Q6ZNG1 722 aa16.87■□□□□ 0.29
ECHDC1-203ENST00000368291 YIF1AO95070 293 aa16.86■□□□□ 0.29
ECHDC1-203ENST00000368291 IFNA21P01568 189 aa16.86■□□□□ 0.29
ECHDC1-203ENST00000368291 ATP5IP56385 69 aaPredicted RBP16.86■□□□□ 0.29
ECHDC1-203ENST00000368291 PUS1Q9Y606 427 aaKnown RBP eCLIP16.86■□□□□ 0.29
ECHDC1-203ENST00000368291 WRBO00258 174 aa16.85■□□□□ 0.29
ECHDC1-203ENST00000368291 CD7P09564 240 aa16.85■□□□□ 0.29
ECHDC1-203ENST00000368291 IGLC1P0CG04 106 aa16.85■□□□□ 0.29
ECHDC1-203ENST00000368291 TIGITQ495A1 244 aa16.85■□□□□ 0.29
ECHDC1-203ENST00000368291 ETFRF1Q6IPR1 90 aa16.85■□□□□ 0.29
ECHDC1-203ENST00000368291 ZNF431Q8TF32 576 aaPredicted RBP16.85■□□□□ 0.29
ECHDC1-203ENST00000368291 SMPXQ9UHP9 88 aa16.85■□□□□ 0.29
ECHDC1-203ENST00000368291 IGHV7-4-1A0A0J9YVY3 117 aa16.84■□□□□ 0.29
ECHDC1-203ENST00000368291 SCAF4O95104 1147 aaKnown RBP16.84■□□□□ 0.29
ECHDC1-203ENST00000368291 IFNA4P05014 189 aa16.84■□□□□ 0.29
ECHDC1-203ENST00000368291 IGHV4-30-4P0DP06 118 aa16.84■□□□□ 0.29
ECHDC1-203ENST00000368291 POLR2GP62487 172 aaKnown RBP eCLIP16.84■□□□□ 0.29
ECHDC1-203ENST00000368291 GUCA2BQ16661 112 aa16.84■□□□□ 0.29
ECHDC1-203ENST00000368291 SLC16A13Q7RTY0 426 aa16.84■□□□□ 0.29
ECHDC1-203ENST00000368291 GTSCR1Q86UQ5 136 aa16.84■□□□□ 0.29
ECHDC1-203ENST00000368291 NPIPB3Q92617 1050 aa16.84■□□□□ 0.29
ECHDC1-203ENST00000368291 CIB3Q96Q77 187 aaPredicted RBP16.84■□□□□ 0.29
ECHDC1-203ENST00000368291 TRAV30A0A087WSZ9 112 aa16.83■□□□□ 0.28
ECHDC1-203ENST00000368291 TRAV25A0A0B4J276 109 aa16.83■□□□□ 0.28
ECHDC1-203ENST00000368291 A8MZ25 164 aa16.83■□□□□ 0.28
ECHDC1-203ENST00000368291 CCSO14618 274 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms