RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 ASAH2BP0C7U1 165 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 OMPP47874 163 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 MIR17HGQ75NE6 70 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 C12orf45Q8N5I9 185 aaPredicted RBP0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 ZNF565Q8N9K5 539 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 OR5A1Q8NGJ0 315 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 PPP1R14BQ96C90 147 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 SLC50A1Q9BRV3 221 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 COMMD5Q9GZQ3 224 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 DCSTAMPQ9H295 470 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 CYSLTR1Q9Y271 337 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 TRAV14DV4A0A0A6YYC5 116 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 TRAV1-1A0A0B4J248 108 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 SMIM23A6NLE4 172 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 FADS1O60427 444 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 SMIM10L2AP0DMW4 78 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 SMIM10L2BP0DMW5 78 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 CDKN2CP42773 168 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 SIGLECL1Q8N7X8 197 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 AQP3Q92482 292 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 GINS4Q9BRT9 223 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 UQCC1Q9NVA1 299 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 MED9Q9NWA0 146 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 ERGIC3Q9Y282 383 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 CCDC144AA2RUR9 1427 aa0.88□□□□□ -2.27
ECHDC1-201ENST00000368287 MYH7BA7E2Y1 1941 aa0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 hADV38S2A0JD32 116 aa0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 OR5F1O95221 314 aa0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 CEBPGP53567 150 aa0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 KHDC3LQ587J8 217 aa0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 PRAP1Q96NZ9 151 aa0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 SERPINI1Q99574 410 aa0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 OR51V1Q9H2C8 321 aa0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 SLC39A9Q9NUM3 307 aa0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 IDI2-AS1Q9NZ38 188 aa0.87□□□□□ -2.27
ECHDC1-201ENST00000368287 NEO1Q92859 1461 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 SCN3AQ9NY46 2000 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 TRAV3A0A0B4J244 114 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 C2orf70A6NJV1 201 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 PIRO00625 290 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 OR2T1O43869 369 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 ZNF682O95780 498 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 IFNA10P01566 189 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 SRSF6Q13247 344 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 CDK10Q15131 360 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 RHEBQ15382 184 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 RGS21Q2M5E4 152 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 IAH1Q2TAA2 248 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 C12orf74Q32Q52 190 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 LINC01554Q52M75 96 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 RNASE10Q5GAN6 216 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 DEFB128Q7Z7B8 93 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 HIST3H2BBQ8N257 126 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 OR4E2Q8NGC2 313 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 WFDC5Q8TCV5 224 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 C20orf27Q9GZN8 174 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 UCK1Q9HA47 277 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 PIK3C2GO75747 1445 aa0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 TNRC6AQ8NDV7 1962 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-201ENST00000368287 A0A0D9SG52 128 aa0.85□□□□□ -2.27
ECHDC1-201ENST00000368287 TMEM114B3SHH9 223 aa0.85□□□□□ -2.27
ECHDC1-201ENST00000368287 SMIM17P0DL12 118 aa0.85□□□□□ -2.27
ECHDC1-201ENST00000368287 DPPA3Q6W0C5 159 aa0.85□□□□□ -2.27
ECHDC1-201ENST00000368287 LINC00311Q8N616 119 aa0.85□□□□□ -2.27
ECHDC1-201ENST00000368287 OR4D11Q8NGI4 311 aa0.85□□□□□ -2.27
ECHDC1-201ENST00000368287 CT55Q8WUE5 264 aa0.85□□□□□ -2.27
ECHDC1-201ENST00000368287 OSTCQ9NRP0 149 aa0.85□□□□□ -2.27
ECHDC1-201ENST00000368287 GLTPQ9NZD2 209 aa0.85□□□□□ -2.27
ECHDC1-201ENST00000368287 hCG_1818297A0A087WSY0 165 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 A8MT66 165 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 RBP1P09455 135 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 COX6A1P12074 109 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 SRIP30626 198 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 SSR2P43308 183 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 ERVS71-1P61550 626 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 EDDM3AQ14507 147 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 KRT222Q8N1A0 295 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 GDPD1Q8N9F7 314 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 MNS1Q8NEH6 495 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 OR52L1Q8NGH7 329 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 OR51A2Q8NGJ7 313 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 SLC25A40Q8TBP6 338 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 BORCS7Q96B45 105 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 ADAT3Q96EY9 351 aaPredicted RBP0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 ODF3Q96PU9 254 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 TRABDQ9H4I3 376 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 OR5AC2Q9NZP5 309 aa0.84□□□□□ -2.27
ECHDC1-201ENST00000368287 SCN8AQ9UQD0 1980 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 RIC1Q4ADV7 1423 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 IGKV2D-26A0A0A0MRZ7 120 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 IGKV1-9A0A0C4DH69 117 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 C1orf196B1AJZ1 125 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 PDE6DO43924 150 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 HAND1O96004 215 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 MGST1P10620 155 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 MIFP14174 115 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 ZNF93P35789 620 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 CCL7P80098 99 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 PLCXD2Q0VAA5 305 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms