RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 ZNF362Q5T0B9 420 aaPredicted RBP8.85□□□□□ -0.99
PTPRK-205ENST00000368213 KCNS1Q96KK3 526 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 SPTBN1Q01082 2364 aaKnown RBP8.84□□□□□ -0.99
PTPRK-205ENST00000368213 CYB561D1Q8N8Q1 229 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 OR11H4Q8NGC9 324 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 MBNL3Q9NUK0 354 aaKnown RBP8.84□□□□□ -0.99
PTPRK-205ENST00000368213 CRPP02741 224 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 SUMO2P61956 95 aaKnown RBP8.84□□□□□ -0.99
PTPRK-205ENST00000368213 PRCDQ00LT1 54 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 TFF3Q07654 80 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 EFNB3Q15768 340 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 KLK15Q9H2R5 256 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 PRR32B1ATL7 298 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 GRNP28799 593 aaKnown RBP8.84□□□□□ -0.99
PTPRK-205ENST00000368213 SPSB3Q6PJ21 355 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 TRAV34A0A0B4J273 112 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 HNRNPA3P51991 378 aaKnown RBP8.84□□□□□ -0.99
PTPRK-205ENST00000368213 MCRIP2Q9BUT9 160 aaKnown RBP8.84□□□□□ -0.99
PTPRK-205ENST00000368213 TRAF4Q9BUZ4 470 aaPredicted RBP8.84□□□□□ -0.99
PTPRK-205ENST00000368213 PROK2Q9HC23 129 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 HEATR5BQ9P2D3 2071 aa8.84□□□□□ -0.99
PTPRK-205ENST00000368213 TRBV7-1A0A0A6YYK4 115 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 PPP1R17O96001 155 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 C10orf55Q5SWW7 151 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 ZNF324BQ6AW86 544 aaPredicted RBP8.83□□□□□ -1
PTPRK-205ENST00000368213 TRBV20OR9-2A0A075B6H5 130 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 SPTAN1Q13813 2472 aaKnown RBP8.83□□□□□ -1
PTPRK-205ENST00000368213 A0A087WV48 116 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 AQP10Q96PS8 301 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 PNRC2Q9NPJ4 139 aaKnown RBP8.83□□□□□ -1
PTPRK-205ENST00000368213 FAM223BA6NKX1 122 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 PAPPA-AS1Q5QFB9 102 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 FAM71F2Q6NXP2 309 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 TMEM144Q7Z5S9 345 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 FAM223AQ8IWN6 122 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 OR10W1Q8NGF6 305 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 TBX15Q96SF7 602 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 Q9H3A6 140 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 DPH3P1Q9H4G8 78 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 IGKV1-27A0A075B6S5 117 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 CFHR2P36980 270 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
PTPRK-205ENST00000368213 MEIG1Q5JSS6 88 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 C1orf122Q6ZSJ8 110 aa8.83□□□□□ -1
PTPRK-205ENST00000368213 PEF1Q9UBV8 284 aaKnown RBP8.83□□□□□ -1
PTPRK-205ENST00000368213 NLRC5Q86WI3 1866 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 CGAP01215 116 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 NIT2Q9NQR4 276 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 TTC28Q96AY4 2481 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 OR1P1Q8NH06 330 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 MED12Q93074 2177 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 TRGV11A0A075B6L2 103 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 WDR81Q562E7 1941 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 OR9G4Q8NGQ1 327 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 PRDM13Q9H4Q3 707 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 C9orf62Q8N4C0 152 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 C1QTNF4Q9BXJ3 329 aa8.82□□□□□ -1
PTPRK-205ENST00000368213 H0YJW9 148 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 SYNJ2BPP57105 145 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 IQCJQ1A5X6 159 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 CLRN3Q8NCR9 226 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 TMEM218A2RU14 115 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 ACTL10Q5JWF8 245 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 RTBDNQ9BSG5 229 aaPredicted RBP8.81□□□□□ -1
PTPRK-205ENST00000368213 PSMG3Q9BT73 122 aaPredicted RBP8.81□□□□□ -1
PTPRK-205ENST00000368213 C5orf52A6NGY3 159 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 OVOL1O14753 267 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 HOXA3O43365 443 aaPredicted RBP8.81□□□□□ -1
PTPRK-205ENST00000368213 ZNF688P0C7X2 276 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 LYRM7Q5U5X0 104 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 MIR17HGQ75NE6 70 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 SHISA3A0PJX4 238 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 F8VVB4 439 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 F8VWA3 439 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 LINC01619G3V211 115 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 KLF17Q5JT82 389 aaPredicted RBP8.81□□□□□ -1
PTPRK-205ENST00000368213 ISOC2Q96AB3 205 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 FBLN5Q9UBX5 448 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 USF3Q68DE3 2245 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 GRIFINA4D1Z8 144 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 PEX7O00628 323 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 PSCAO43653 123 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 SOD3P08294 240 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 NAT1P18440 290 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 NHLRC3Q5JS37 347 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 LCN12Q6JVE5 192 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 FAM89BQ8N5H3 189 aa8.81□□□□□ -1
PTPRK-205ENST00000368213 PHOX2AO14813 284 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 MALP21145 153 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 FBLN7Q53RD9 439 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 LAIR2Q6ISS4 152 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 SMDT1Q9H4I9 107 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 OTORQ9NRC9 128 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 TRAV21A0A0B4J279 112 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 C7orf77A4D0Y5 90 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 C5orf63A6NC05 138 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 CENPWQ5EE01 88 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 FMC1Q96HJ9 113 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 IGFL2Q6UWQ7 119 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 FOXL2NBQ6ZUU3 175 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms