RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 DLX4Q92988 240 aaPredicted RBP7.3□□□□□ -1.24
SYNE1-206ENST00000367253 PRADC1Q9BSG0 188 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 NAV3Q8IVL0 2385 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 RAE1P78406 368 aaKnown RBP7.3□□□□□ -1.24
SYNE1-206ENST00000367253 KLF17Q5JT82 389 aaPredicted RBP7.3□□□□□ -1.24
SYNE1-206ENST00000367253 GAPTQ8N292 157 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 REG4Q9BYZ8 158 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 IGHV3OR15-7A0A075B7D8 119 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 C17orf100A8MU93 164 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 PLPP3O14495 311 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 TDGF1P13385 188 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 FXYD3Q14802 87 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 TAL2Q16559 108 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 CD300LDQ6UXZ3 194 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 DAD1P61803 113 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 ARPC1AQ92747 370 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 AICDAQ9GZX7 198 aa7.3□□□□□ -1.24
SYNE1-206ENST00000367253 SPANXB1Q9NS25 103 aaPredicted RBP7.3□□□□□ -1.24
SYNE1-206ENST00000367253 ASPDHA6ND91 283 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 MSMBP08118 114 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 ZNF79Q15937 498 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 ATG4DQ86TL0 474 aaPredicted RBP7.29□□□□□ -1.24
SYNE1-206ENST00000367253 TMEM167AQ8TBQ9 72 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 UBE2E2Q96LR5 201 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 SCTP09683 121 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 RUNX1Q01196 453 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 Q5BKY6 102 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 Q6ZS92 163 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.29□□□□□ -1.24
SYNE1-206ENST00000367253 BUB3O43684 328 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 AMBPP02760 352 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 GPX1P07203 203 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 RPS20P60866 119 aaKnown RBP7.29□□□□□ -1.24
SYNE1-206ENST00000367253 PSG9Q00887 426 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 PSG6Q00889 435 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 SAXO1Q8IYX7 474 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 GPR132Q9UNW8 380 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 RALGAPA2Q2PPJ7 1873 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 A0A0B4J2E0 115 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 A0A1B0GX12 115 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 CCL25O15444 150 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 C1QL1O75973 258 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 C3orf36Q3SXR2 165 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 OR10AC1Q8NH08 325 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 RNF183Q96D59 192 aa7.29□□□□□ -1.24
SYNE1-206ENST00000367253 PQLC2Q6ZP29 291 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 NPVFQ9HCQ7 196 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 CCL28Q9NRJ3 127 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 RPRMQ9NS64 109 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 MGAMO43451 1857 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 CACNA1EQ15878 2313 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 C9JAW5 83 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 HYPMO75409 117 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 TMEM50BP56557 158 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 PRSS53Q2L4Q9 553 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 SLC25A53Q5H9E4 307 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 TMEM252Q8N6L7 170 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 KLHL30-AS1Q8NEE0 82 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 CARHSP1Q9Y2V2 147 aaKnown RBP7.28□□□□□ -1.24
SYNE1-206ENST00000367253 TM4SF5O14894 197 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 CNRIP1Q96F85 164 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-206ENST00000367253 PRSS27Q9BQR3 290 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 TNFRSF12AQ9NP84 129 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 IGKV3D-15A0A087WSY6 115 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 IGKV3-15P01624 115 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 RND3P61587 244 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 PRR31Q5SQ13 230 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 CRIPAKQ8N1N5 446 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 PGLYRP4Q96LB8 373 aa7.28□□□□□ -1.24
SYNE1-206ENST00000367253 MUC21A0A0G2JKD1 596 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 MUC21A0A140T8X8 626 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 MOSP00540 346 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 VAX1Q5SQQ9 334 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 MUC21Q5SSG8 566 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 SPATA25Q9BR10 227 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 EPDR1Q9UM22 224 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 MRPS18CQ9Y3D5 142 aaKnown RBP7.27□□□□□ -1.25
SYNE1-206ENST00000367253 PXMP4Q9Y6I8 212 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 TRAV12-3A0A0B4J271 114 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 SOCS1O15524 211 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 MLNRO43193 412 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 TRAV25A0A0B4J276 109 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 CD5LO43866 347 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 FAM27BQ5VT28 67 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 RNF122Q9H9V4 155 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 AKAP6Q13023 2319 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 SMIM9A6NGZ8 99 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 TMEM250H0YL14 139 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 WFDC11Q8NEX6 87 aa7.27□□□□□ -1.25
SYNE1-206ENST00000367253 TINCRA0A1B0GVN0 87 aa7.26□□□□□ -1.25
SYNE1-206ENST00000367253 PRKNO60260 465 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-206ENST00000367253 FGF12P61328 243 aa7.26□□□□□ -1.25
SYNE1-206ENST00000367253 C9orf66Q5T8R8 295 aa7.26□□□□□ -1.25
SYNE1-206ENST00000367253 MINOS1Q5TGZ0 78 aa7.26□□□□□ -1.25
SYNE1-206ENST00000367253 APCDD1LQ8NCL9 501 aa7.26□□□□□ -1.25
SYNE1-206ENST00000367253 OR11H4Q8NGC9 324 aa7.26□□□□□ -1.25
SYNE1-206ENST00000367253 SLC25A39Q9BZJ4 359 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-206ENST00000367253 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
SYNE1-206ENST00000367253 MINOS1-NBL1R4GNA1 71 aa7.26□□□□□ -1.25
SYNE1-206ENST00000367253 FAM231BA6NCW3 169 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms