RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 LEAP2Q969E1 77 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 RPP21Q9H633 154 aaKnown RBP7.53□□□□□ -1.2
SYNE1-205ENST00000367251 C1QTNF9BB2RNN3 333 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 TCF21O43680 179 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 CGAP01215 116 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 SUPT4H1P63272 117 aaKnown RBP7.53□□□□□ -1.2
SYNE1-205ENST00000367251 WDR82Q6UXN9 313 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 COLCA1Q6ZS62 124 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 GGNQ86UU5 652 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 CHCHD5Q9BSY4 110 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 WDR81Q562E7 1941 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 TRBV24-1A0A075B6N3 115 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 GAGE10A6NGK3 116 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 HEPN1Q6WQI6 88 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 TNFRSF14Q92956 283 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 OTORQ9NRC9 128 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 SCO2A0A1W2PP80 73 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 H3BRM9 83 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 M0R381 172 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 CIARTQ8N365 385 aaPredicted RBP7.53□□□□□ -1.2
SYNE1-205ENST00000367251 EDA2RQ9HAV5 297 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 DPM3Q9P2X0 92 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 WDR83OSQ9Y284 106 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 CBLN1P23435 193 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 FHL1Q13642 323 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 TMEM170BQ5T4T1 132 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 CNOT1A5YKK6 2376 aaKnown RBP7.53□□□□□ -1.2
SYNE1-205ENST00000367251 VWA8A3KMH1 1905 aa7.52□□□□□ -1.2
SYNE1-205ENST00000367251 NAPSAO96009 420 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
SYNE1-205ENST00000367251 FAM27E3Q08E93 113 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 TET1Q8NFU7 2136 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 POLEQ07864 2286 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 C17orf100A8MU93 164 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 F8WEM9 126 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 IL4P05112 153 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 PRCDQ00LT1 54 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 GOLT1AQ6ZVE7 132 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 HIST1H4GQ99525 98 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 DEPPQ9NTK1 212 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 ZNF257Q9Y2Q1 563 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 IGKV1D-8A0A087WSZ0 117 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 IGKV3D-20A0A0C4DH25 116 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 IGKV1-12A0A0C4DH73 117 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 ETV2O00321 342 aaPredicted RBP7.52□□□□□ -1.21
SYNE1-205ENST00000367251 IGKV1D-12P01611 117 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 ATP5G3P48201 142 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 ERVK11-1P61568 191 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 OR10J3Q5JRS4 329 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 TEX45Q8NA69 505 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 AGMATQ9BSE5 352 aa7.52□□□□□ -1.21
SYNE1-205ENST00000367251 C11orf68Q9H3H3 251 aaKnown RBP7.52□□□□□ -1.21
SYNE1-205ENST00000367251 TBL2Q9Y4P3 447 aaKnown RBP7.52□□□□□ -1.21
SYNE1-205ENST00000367251 OTX1P32242 354 aaPredicted RBP7.52□□□□□ -1.21
SYNE1-205ENST00000367251 CADP27708 2225 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 GRIFINA4D1Z8 144 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 PVRIGQ6DKI7 326 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 PPP1R27Q86WC6 154 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 SPAG8Q99932 426 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-205ENST00000367251 FBXL7Q9UJT9 491 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 RNF114Q9Y508 228 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 SAA2-SAA4A0A096LPE2 208 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 ATP5LO75964 103 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 SAA2P0DJI9 122 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-205ENST00000367251 DUTP33316 252 aaKnown RBP7.51□□□□□ -1.21
SYNE1-205ENST00000367251 NMSQ5H8A3 153 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 C9orf106Q8NAJ2 232 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 GNB1LQ9BYB4 327 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 FNDC1Q4ZHG4 1894 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-205ENST00000367251 COLCA2A8K830 154 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 H3BTX0 84 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 SAA1P0DJI8 122 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-205ENST00000367251 DNLZQ5SXM8 178 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 UNQ6494/PRO21346Q6UXR6 183 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 WFIKKN1Q96NZ8 548 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 MRPL20Q9BYC9 149 aaKnown RBP7.51□□□□□ -1.21
SYNE1-205ENST00000367251 CST9LQ9H4G1 147 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 ANAPC10Q9UM13 185 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 LY96Q9Y6Y9 160 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 A0A1B0GUT8 65 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 TSPAN13O95857 204 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 MIR17HGQ75NE6 70 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 S4R3C0 116 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 NLRC5Q86WI3 1866 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 GPR183P32249 361 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 ASIPP42127 132 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 TMEM167AQ8TBQ9 72 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 FOXA2Q9Y261 457 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-205ENST00000367251 SCN5AQ14524 2016 aa7.51□□□□□ -1.21
SYNE1-205ENST00000367251 CBLN4Q9NTU7 201 aa7.5□□□□□ -1.21
SYNE1-205ENST00000367251 IGKV1D-33P01593 117 aa7.5□□□□□ -1.21
SYNE1-205ENST00000367251 IGKV1-33P01594 117 aa7.5□□□□□ -1.21
SYNE1-205ENST00000367251 CLEC19AQ6UXS0 136 aa7.5□□□□□ -1.21
SYNE1-205ENST00000367251 ATP5L2Q7Z4Y8 100 aa7.5□□□□□ -1.21
SYNE1-205ENST00000367251 MOSP00540 346 aa7.5□□□□□ -1.21
SYNE1-205ENST00000367251 CELA3BP08861 270 aa7.5□□□□□ -1.21
SYNE1-205ENST00000367251 RASL11AQ6T310 242 aa7.5□□□□□ -1.21
SYNE1-205ENST00000367251 FAM216BQ8N7L0 139 aa7.5□□□□□ -1.21
SYNE1-205ENST00000367251 RNASE6Q93091 150 aaKnown RBP7.5□□□□□ -1.21
SYNE1-205ENST00000367251 TRBV20OR9-2A0A075B6H5 130 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms