RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 PRR20DP86480 221 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 PRR20BP86481 221 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 PRR20AP86496 221 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 C10orf113Q5VZT2 155 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 TCF24Q7RTU0 167 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 C11orf52Q96A22 123 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 DAZAP1Q96EP5 407 aaKnown RBP6.69□□□□□ -1.34
CD46-208ENST00000367042 MCRIP2Q9BUT9 160 aaKnown RBP6.69□□□□□ -1.34
CD46-208ENST00000367042 TP73-AS1Q9UF72 201 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 ZNF835Q9Y2P0 537 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 KBTBD11-OT1A0A1B0GTJ5 212 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 IZUMO1RA6ND01 250 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 FAM90A9PA6NNJ1 464 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 MOSP00540 346 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 APOA2P02652 100 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 LINC00614P0C842 121 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 CCL8P80075 99 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 FDCSPQ8NFU4 85 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 C18orf32Q8TCD1 76 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 RAB9BQ9NP90 201 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 TMEM14BQ9NUH8 114 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 FOXA2Q9Y261 457 aaPredicted RBP6.69□□□□□ -1.34
CD46-208ENST00000367042 SSUH2Q9Y2M2 353 aa6.69□□□□□ -1.34
CD46-208ENST00000367042 LOC102724200A0A096LPH7 203 aaPredicted RBP6.68□□□□□ -1.34
CD46-208ENST00000367042 TEX50A0A1B0GTY4 177 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 SRRM4A7MD48 611 aaKnown RBP6.68□□□□□ -1.34
CD46-208ENST00000367042 CORTO00230 105 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 ISLRO14498 428 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 BTF3P20290 206 aaKnown RBP6.68□□□□□ -1.34
CD46-208ENST00000367042 PPOXP50336 477 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 TMPRSS3P57727 454 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 TCTAP57738 103 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 TNFAIP6P98066 277 aaPredicted RBP6.68□□□□□ -1.34
CD46-208ENST00000367042 TRIP6Q15654 476 aaKnown RBP6.68□□□□□ -1.34
CD46-208ENST00000367042 ETFRF1Q6IPR1 90 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 HCP5Q6MZN7 132 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 ZCCHC24Q8N2G6 241 aaKnown RBP6.68□□□□□ -1.34
CD46-208ENST00000367042 OR10X1Q8NGY0 326 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 SARAFQ96BY9 339 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 SLC25A33Q9BSK2 321 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 IGHV3-72A0A0B4J1Y9 119 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 SSBP2P81877 361 aaPredicted RBP6.68□□□□□ -1.34
CD46-208ENST00000367042 PRCDQ00LT1 54 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 TBR1Q16650 682 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 COX19Q49B96 90 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 NIT1Q86X76 327 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 NUP35Q8NFH5 326 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 NEUROG1Q92886 237 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 ZNF503Q96F45 646 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 PMCHL2Q9BQD1 86 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 CHODLQ9H9P2 273 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 SAP30LQ9HAJ7 183 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 SLC25A10Q9UBX3 287 aaPredicted RBP6.68□□□□□ -1.34
CD46-208ENST00000367042 WASHC3Q9Y3C0 194 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 DYSFO75923 2080 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 RIF1Q5UIP0 2472 aaKnown RBP6.68□□□□□ -1.34
CD46-208ENST00000367042 PGPA6NDG6 321 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 CBY3A6NI87 242 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 HSBP1L1C9JCN9 74 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 TSPOP30536 169 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 BPIFB3P59826 476 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 GAGE1Q13065 139 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 MSMPQ1L6U9 139 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 C19orf35Q6ZS72 473 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 PDPNQ86YL7 162 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 ZNF738Q8NE65 137 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 NUDT10Q8NFP7 164 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 NUDT11Q96G61 164 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 ADTRPQ96IZ2 230 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 PGLYRP4Q96LB8 373 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 LY96Q9Y6Y9 160 aa6.68□□□□□ -1.34
CD46-208ENST00000367042 UPK2O00526 184 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 PEX7O00628 323 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 CHEK1O14757 476 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 ESDP10768 282 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 PRB3Q04118 309 aaPredicted RBP6.67□□□□□ -1.34
CD46-208ENST00000367042 C17orf58Q2M2W7 97 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 LEMD1Q68G75 181 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 LINC00305Q7Z4B0 112 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 FAM90A1Q86YD7 464 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 MRPL20Q9BYC9 149 aaKnown RBP6.67□□□□□ -1.34
CD46-208ENST00000367042 RNF7Q9UBF6 113 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 SH3BGRL2Q9UJC5 107 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 SELENOKQ9Y6D0 94 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 SPTA1P02549 2419 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 A0A1W2PRE2 83 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 FAM181BA6NEQ2 426 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 HIST1H1EP10412 219 aaKnown RBP6.67□□□□□ -1.34
CD46-208ENST00000367042 CCL3L1P16619 93 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 CD69Q07108 199 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 SSX8Q7RTT4 187 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 SPACA3Q8IXA5 215 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 NBASA2RRP1 2371 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 TTC28Q96AY4 2481 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 WNK2Q9Y3S1 2297 aa6.67□□□□□ -1.34
CD46-208ENST00000367042 PTPRZ1P23471 2315 aaPredicted RBP6.67□□□□□ -1.34
CD46-208ENST00000367042 F2RL2O00254 374 aa6.66□□□□□ -1.34
CD46-208ENST00000367042 SNAI2O43623 268 aa6.66□□□□□ -1.34
CD46-208ENST00000367042 FLYWCH2Q96CP2 140 aaKnown RBP6.66□□□□□ -1.34
CD46-208ENST00000367042 ACACAQ13085 2346 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms