RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 PFN4Q8NHR9 129 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 IMP4Q96G21 291 aaKnown RBP0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR52E6Q96RD3 313 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 TMEM147Q9BVK8 224 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 COMMD5Q9GZQ3 224 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 C11orf68Q9H3H3 251 aaKnown RBP0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 SLC39A9Q9NUM3 307 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 FBXL12Q9NXK8 326 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 TP73-AS1Q9UF72 201 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 PKIGQ9Y2B9 76 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 DOCK4Q8N1I0 1966 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 NUP98P52948 1817 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 WRNQ14191 1432 aaPredicted RBP eCLIP0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 TRAV9-1A0A075B6T8 112 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 A0A0D9SG52 128 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 EXOC1LA0A1B0GW35 172 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 PQLC2LA1A4F0 135 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 C2orf70A6NJV1 201 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 SMIM23A6NLE4 172 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 M0R036 132 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 HYPMO75409 117 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 AHSA1O95433 338 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 CRYZL1O95825 349 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 IFNA10P01566 189 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 COX6A1P12074 109 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST1H1TP22492 207 aaPredicted RBP0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 SULT1A1P50225 295 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 NKX2-5P52952 324 aaPredicted RBP0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR2F1Q13607 317 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 RHEBQ15382 184 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 Q6ZQT0 140 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 PHF13Q86YI8 300 aaPredicted RBP0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 C20orf196Q8IYI0 205 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST3H2BBQ8N257 126 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 LINC00311Q8N616 119 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 TMEM86BQ8N661 226 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 SIGLECL1Q8N7X8 197 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR5A1Q8NGJ0 315 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 TERB2Q8NHR7 220 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 H1FXQ92522 213 aaKnown RBP0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 TOMM6Q96B49 74 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 DCUN1D1Q96GG9 259 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 PPP1R2P1Q96PQ5 205 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 ULBP3Q9BZM4 244 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 KLK9Q9UKQ9 250 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 ERGIC3Q9Y282 383 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 TMEM56-RWDD3S4R434 201 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 NUP155O75694 1391 aa0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 ARHGEF28Q8N1W1 1705 aaKnown RBP0.3□□□□□ -2.36
RNU4-48P-201ENST00000365559 N4BP2Q86UW6 1770 aaPredicted RBP0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 MYH3P11055 1940 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 PTPRDP23468 1912 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 MED1Q15648 1581 aaPredicted RBP0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 LOC110117498A0A087WWA1 95 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 CLDN24A6NM45 220 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 BUB1B-PAK6H3BSN5 160 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 FAAHO00519 579 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 PIRO00625 290 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 CHP2O43745 196 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR1I1O60431 355 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR2B3O76000 313 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 TCL1BO95988 128 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 IFNA16P05015 189 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 CTSDP07339 412 aaPredicted RBP0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 MGST1P10620 155 aaKnown RBP0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 S100A4P26447 101 aaKnown RBP0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 ZNF93P35789 620 aaPredicted RBP0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 SSR2P43308 183 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 RPS20P60866 119 aaKnown RBP0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 CDC42P60953 191 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 RAB4BP61018 213 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 RNASE10Q5GAN6 216 aaKnown RBP0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 PTRHD1Q6GMV3 140 aaKnown RBP0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 TRAPPC6BQ86SZ2 158 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 KRT222Q8N1A0 295 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 CLDN22Q8N7P3 220 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 GPR146Q96CH1 333 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 CCDC42Q96M95 316 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 TSPAN32Q96QS1 320 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 NIPSNAP1Q9BPW8 284 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 CMSS1Q9BQ75 279 aaKnown RBP0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 MIXL1Q9H2W2 232 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 OSTCQ9NRP0 149 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 TAS2R4Q9NYW5 299 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 ZFP30Q9Y2G7 519 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 ZGRF1Q86YA3 2104 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 MTUS2Q5JR59 1369 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 NEO1Q92859 1461 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 CNTRLQ7Z7A1 2325 aa0.29□□□□□ -2.36
RNU4-48P-201ENST00000365559 ASCC3Q8N3C0 2202 aaKnown RBP0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 TRBV6-8A0A0A6YYG3 113 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 TRAV3A0A0B4J244 114 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 TRAV26-2A0A0B4J265 109 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 FAM236DA0A1B0GTK5 79 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR4C46A6NHA9 309 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 C1orf196B1AJZ1 125 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 GOLGA6L19H0YKK7 550 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 SULT1B1O43704 296 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR2T1O43869 369 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms