RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 FAM166AQ6J272 317 aa15.38■□□□□ 0.05
CLIP2-202ENST00000361545 TRAV14DV4A0A0A6YYC5 116 aa15.38■□□□□ 0.05
CLIP2-202ENST00000361545 COL8A2P25067 703 aa15.38■□□□□ 0.05
CLIP2-202ENST00000361545 FOXA3P55318 350 aaPredicted RBP15.38■□□□□ 0.05
CLIP2-202ENST00000361545 HEPN1Q6WQI6 88 aa15.38■□□□□ 0.05
CLIP2-202ENST00000361545 EFNB1P98172 346 aa15.38■□□□□ 0.05
CLIP2-202ENST00000361545 PLA2G2CQ5R387 149 aa15.38■□□□□ 0.05
CLIP2-202ENST00000361545 TNFRSF14Q92956 283 aa15.38■□□□□ 0.05
CLIP2-202ENST00000361545 TMEM250H0YL14 139 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 SRD5A1P18405 259 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 TRGV2A0A075B6R0 118 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 K7ERU9 68 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 SLC17A3O00476 420 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 SSC4DQ8WTU2 575 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 SP5Q6BEB4 398 aaPredicted RBP15.37■□□□□ 0.05
CLIP2-202ENST00000361545 STHQ8IWL8 128 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 KIR3DL3Q8N743 410 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 TNFRSF18Q9Y5U5 241 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 H3BUX3 64 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 PRSS2P07478 247 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 ADIPOQQ15848 244 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 PET117Q6UWS5 81 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 BPESC1Q9GZL8 116 aa15.37■□□□□ 0.05
CLIP2-202ENST00000361545 TRAV41A0A0B4J266 112 aa15.36■□□□□ 0.05
CLIP2-202ENST00000361545 DDTP30046 118 aa15.36■□□□□ 0.05
CLIP2-202ENST00000361545 ZNF506Q5JVG8 444 aa15.36■□□□□ 0.05
CLIP2-202ENST00000361545 H3BVH4 76 aa15.36■□□□□ 0.05
CLIP2-202ENST00000361545 PCP4P48539 62 aa15.36■□□□□ 0.05
CLIP2-202ENST00000361545 DOCK7Q96N67 2140 aa15.36■□□□□ 0.05
CLIP2-202ENST00000361545 PRB4P10163 310 aaPredicted RBP15.36■□□□□ 0.05
CLIP2-202ENST00000361545 HBBP68871 147 aa15.36■□□□□ 0.05
CLIP2-202ENST00000361545 GEMIN7Q9H840 131 aaKnown RBP15.36■□□□□ 0.05
CLIP2-202ENST00000361545 PRCDQ00LT1 54 aa15.36■□□□□ 0.05
CLIP2-202ENST00000361545 ZNF600Q6ZNG1 722 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 OR4D5Q8NGN0 318 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 ZNF585BQ52M93 769 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 SIP14410 1827 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 A6NDN8 102 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 GNG5P63218 68 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 CYB5R2Q6BCY4 276 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 PCNX1Q96RV3 2341 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 CBLN1P23435 193 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 C5orf24Q7Z6I8 188 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 PRSS33Q8NF86 280 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 TMEM167AQ8TBQ9 72 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 TICRRQ7Z2Z1 1910 aa15.35■□□□□ 0.05
CLIP2-202ENST00000361545 PVRIGQ6DKI7 326 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 FAM71F2Q6NXP2 309 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 ARL6IP6Q8N6S5 226 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 RNF222A6NCQ9 220 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 RAB37Q96AX2 223 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 ABCA1O95477 2261 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 IGHV1-3A0A0C4DH29 117 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 RNF144BQ7Z419 303 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 E7EQL1 145 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 LHFPL4Q7Z7J7 247 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 OR1P1Q8NH06 330 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 OR10AG1Q8NH19 301 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 WFDC12Q8WWY7 111 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 TMEM8BA6NDV4 472 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 BTCP35070 178 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 C3orf36Q3SXR2 165 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 TPTE2P1Q5T6R2 138 aa15.34■□□□□ 0.05
CLIP2-202ENST00000361545 C7orf71A4D174 169 aa15.33■□□□□ 0.05
CLIP2-202ENST00000361545 PYYP10082 97 aa15.33■□□□□ 0.05
CLIP2-202ENST00000361545 PAX8Q06710 450 aa15.33■□□□□ 0.05
CLIP2-202ENST00000361545 LYPD2Q6UXB3 125 aa15.33■□□□□ 0.05
CLIP2-202ENST00000361545 ZNF407Q9C0G0 2248 aa15.33■□□□□ 0.05
CLIP2-202ENST00000361545 ARTNQ5T4W7 220 aa15.33■□□□□ 0.04
CLIP2-202ENST00000361545 CD33P20138 364 aa15.33■□□□□ 0.04
CLIP2-202ENST00000361545 SUMO2P61956 95 aaKnown RBP15.33■□□□□ 0.04
CLIP2-202ENST00000361545 MEIG1Q5JSS6 88 aa15.33■□□□□ 0.04
CLIP2-202ENST00000361545 WNK2Q9Y3S1 2297 aa15.33■□□□□ 0.04
CLIP2-202ENST00000361545 H7C1H1 209 aa15.33■□□□□ 0.04
CLIP2-202ENST00000361545 FMC1Q96HJ9 113 aa15.33■□□□□ 0.04
CLIP2-202ENST00000361545 GAFA1Q96PS6 74 aa15.33■□□□□ 0.04
CLIP2-202ENST00000361545 LGALS3P17931 250 aaKnown RBP15.32■□□□□ 0.04
CLIP2-202ENST00000361545 MAPK1IP1LQ8NDC0 245 aa15.32■□□□□ 0.04
CLIP2-202ENST00000361545 A0A1B0GV90 55 aa15.32■□□□□ 0.04
CLIP2-202ENST00000361545 REC114Q7Z4M0 266 aa15.32■□□□□ 0.04
CLIP2-202ENST00000361545 GLRX5Q86SX6 157 aa15.32■□□□□ 0.04
CLIP2-202ENST00000361545 SDF2L1Q9HCN8 221 aa15.32■□□□□ 0.04
CLIP2-202ENST00000361545 C15orf32Q32M92 178 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 RNF126Q9BV68 326 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 PPP1R17O96001 155 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 CD7P09564 240 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 LOC105371267A0A1B0GV96 52 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 VENTXO95231 258 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 DMRT1Q9Y5R6 373 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 PLXNA3P51805 1871 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 CXorf65A6NEN9 183 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 RNF223E7ERA6 249 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 BIVMQ86UB2 503 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 GPR61Q9BZJ8 451 aa15.31■□□□□ 0.04
CLIP2-202ENST00000361545 UQCRFS1P47985 274 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 C18orf15Q96N68 181 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 MUC6Q6W4X9 2439 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 IGKV1D-17A0A075B6S4 117 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 SAP30O75446 220 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 PHF3Q92576 2039 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms