RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 CCDC88CQ9P219 2028 aa16.88■□□□□ 0.29
SMURF1-202ENST00000361368 PLSCR4Q9NRQ2 329 aa16.88■□□□□ 0.29
SMURF1-202ENST00000361368 SLC25A15Q9Y619 301 aa16.88■□□□□ 0.29
SMURF1-202ENST00000361368 CD24P25063 80 aa16.87■□□□□ 0.29
SMURF1-202ENST00000361368 CARHSP1Q9Y2V2 147 aaKnown RBP16.87■□□□□ 0.29
SMURF1-202ENST00000361368 A0A087WX48 190 aa16.87■□□□□ 0.29
SMURF1-202ENST00000361368 Q5BKY6 102 aa16.87■□□□□ 0.29
SMURF1-202ENST00000361368 FAM169BQ8N8A8 192 aa16.87■□□□□ 0.29
SMURF1-202ENST00000361368 IGKV3D-20A0A0C4DH25 116 aa16.87■□□□□ 0.29
SMURF1-202ENST00000361368 ZNF646O15015 1829 aaPredicted RBP16.87■□□□□ 0.29
SMURF1-202ENST00000361368 GNG5P63218 68 aa16.86■□□□□ 0.29
SMURF1-202ENST00000361368 IMMP2LQ96T52 175 aa16.86■□□□□ 0.29
SMURF1-202ENST00000361368 C11orf44Q8N8P7 122 aa16.86■□□□□ 0.29
SMURF1-202ENST00000361368 DUTP33316 252 aaKnown RBP16.86■□□□□ 0.29
SMURF1-202ENST00000361368 ERVK11-1P61568 191 aa16.86■□□□□ 0.29
SMURF1-202ENST00000361368 RP1P56715 2156 aa16.86■□□□□ 0.29
SMURF1-202ENST00000361368 SPSB3Q6PJ21 355 aa16.86■□□□□ 0.29
SMURF1-202ENST00000361368 VMO1Q7Z5L0 202 aa16.86■□□□□ 0.29
SMURF1-202ENST00000361368 DOCK5Q9H7D0 1870 aa16.86■□□□□ 0.29
SMURF1-202ENST00000361368 HBDP02042 147 aa16.86■□□□□ 0.29
SMURF1-202ENST00000361368 PLNP26678 52 aa16.86■□□□□ 0.29
SMURF1-202ENST00000361368 ZFC3H1O60293 1989 aaKnown RBP16.85■□□□□ 0.29
SMURF1-202ENST00000361368 OSTCQ9NRP0 149 aa16.85■□□□□ 0.29
SMURF1-202ENST00000361368 IGHV2-26A0A0B4J1V2 119 aa16.85■□□□□ 0.29
SMURF1-202ENST00000361368 ZCCHC24Q8N2G6 241 aaKnown RBP16.85■□□□□ 0.29
SMURF1-202ENST00000361368 SPOCK3Q9BQ16 436 aa16.85■□□□□ 0.29
SMURF1-202ENST00000361368 COL5A3P25940 1745 aaPredicted RBP16.85■□□□□ 0.29
SMURF1-202ENST00000361368 CTAG1AP78358 180 aa16.85■□□□□ 0.29
SMURF1-202ENST00000361368 C11orf68Q9H3H3 251 aaKnown RBP16.85■□□□□ 0.29
SMURF1-202ENST00000361368 MORN3Q6PF18 240 aaPredicted RBP16.84■□□□□ 0.29
SMURF1-202ENST00000361368 OR2K2Q8NGT1 345 aa16.84■□□□□ 0.29
SMURF1-202ENST00000361368 CASP8AP2Q9UKL3 1982 aa16.84■□□□□ 0.29
SMURF1-202ENST00000361368 LINC00587B1AMM8 73 aa16.84■□□□□ 0.29
SMURF1-202ENST00000361368 PRB3Q04118 309 aaPredicted RBP16.84■□□□□ 0.29
SMURF1-202ENST00000361368 RPUSD1Q9UJJ7 312 aaKnown RBP16.84■□□□□ 0.29
SMURF1-202ENST00000361368 DPM2O94777 84 aa16.84■□□□□ 0.29
SMURF1-202ENST00000361368 PAX2Q02962 417 aa16.84■□□□□ 0.29
SMURF1-202ENST00000361368 DEFB121Q5J5C9 76 aa16.84■□□□□ 0.29
SMURF1-202ENST00000361368 PRDM13Q9H4Q3 707 aa16.84■□□□□ 0.29
SMURF1-202ENST00000361368 KIF13BQ9NQT8 1826 aa16.84■□□□□ 0.29
SMURF1-202ENST00000361368 IGKV1D-13A0A0B4J2D9 117 aa16.83■□□□□ 0.29
SMURF1-202ENST00000361368 ERVH48-1M5A8F1 160 aa16.83■□□□□ 0.29
SMURF1-202ENST00000361368 IGKV1-13P0DP09 117 aa16.83■□□□□ 0.29
SMURF1-202ENST00000361368 SRSF7Q16629 238 aaKnown RBP eCLIP16.83■□□□□ 0.29
SMURF1-202ENST00000361368 SLC25A16P16260 332 aa16.83■□□□□ 0.28
SMURF1-202ENST00000361368 TDGF1P3P51864 188 aa16.83■□□□□ 0.28
SMURF1-202ENST00000361368 LYZL4Q96KX0 146 aa16.83■□□□□ 0.28
SMURF1-202ENST00000361368 COL11A2P13942 1736 aaPredicted RBP16.83■□□□□ 0.28
SMURF1-202ENST00000361368 OR5A1Q8NGJ0 315 aa16.83■□□□□ 0.28
SMURF1-202ENST00000361368 C1QTNF4Q9BXJ3 329 aa16.83■□□□□ 0.28
SMURF1-202ENST00000361368 ATAD5Q96QE3 1844 aa16.83■□□□□ 0.28
SMURF1-202ENST00000361368 S100A7L2Q5SY68 101 aa16.83■□□□□ 0.28
SMURF1-202ENST00000361368 MBNL3Q9NUK0 354 aaKnown RBP16.83■□□□□ 0.28
SMURF1-202ENST00000361368 PINLYPA6NC86 204 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 SRRM5B3KS81 715 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 CKS1BP61024 79 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 UNQ6494/PRO21346Q6UXR6 183 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 RNF114Q9Y508 228 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 GNLYP22749 145 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 TPTE2P1Q5T6R2 138 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 RNF166Q96A37 237 aaPredicted RBP16.82■□□□□ 0.28
SMURF1-202ENST00000361368 COQ2Q96H96 371 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 C14orf144Q96I85 54 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 LAIR2Q6ISS4 152 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 M0R1W7 72 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 CD33P20138 364 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 HEPN1Q6WQI6 88 aa16.82■□□□□ 0.28
SMURF1-202ENST00000361368 RPL23P62829 140 aaKnown RBP16.81■□□□□ 0.28
SMURF1-202ENST00000361368 RCHY1Q96PM5 261 aa16.81■□□□□ 0.28
SMURF1-202ENST00000361368 CHTOPQ9Y3Y2 248 aaKnown RBP16.81■□□□□ 0.28
SMURF1-202ENST00000361368 IGHV1-8P0DP01 117 aa16.81■□□□□ 0.28
SMURF1-202ENST00000361368 SLC25A2Q9BXI2 301 aa16.81■□□□□ 0.28
SMURF1-202ENST00000361368 RAMP3O60896 148 aa16.81■□□□□ 0.28
SMURF1-202ENST00000361368 LINC01559Q495D7 138 aa16.81■□□□□ 0.28
SMURF1-202ENST00000361368 FAM89BQ8N5H3 189 aa16.81■□□□□ 0.28
SMURF1-202ENST00000361368 SPCS1Q9Y6A9 102 aa16.81■□□□□ 0.28
SMURF1-202ENST00000361368 SHISA3A0PJX4 238 aa16.81■□□□□ 0.28
SMURF1-202ENST00000361368 RNASE7Q9H1E1 156 aaKnown RBP16.81■□□□□ 0.28
SMURF1-202ENST00000361368 POLR2AP24928 1970 aaKnown RBP16.81■□□□□ 0.28
SMURF1-202ENST00000361368 PYYP10082 97 aa16.8■□□□□ 0.28
SMURF1-202ENST00000361368 C21orf62-AS1Q17RA5 79 aa16.8■□□□□ 0.28
SMURF1-202ENST00000361368 C15orf32Q32M92 178 aa16.8■□□□□ 0.28
SMURF1-202ENST00000361368 PGPEP1LA6NFU8 196 aa16.8■□□□□ 0.28
SMURF1-202ENST00000361368 SNAI2O43623 268 aa16.8■□□□□ 0.28
SMURF1-202ENST00000361368 RPL36AP83881 106 aaKnown RBP16.8■□□□□ 0.28
SMURF1-202ENST00000361368 ST6GALNAC3Q8NDV1 305 aa16.8■□□□□ 0.28
SMURF1-202ENST00000361368 RPL36ALQ969Q0 106 aaKnown RBP16.8■□□□□ 0.28
SMURF1-202ENST00000361368 TRBV7-1A0A0A6YYK4 115 aa16.8■□□□□ 0.28
SMURF1-202ENST00000361368 FOXF2Q12947 444 aa16.8■□□□□ 0.28
SMURF1-202ENST00000361368 C5orf30Q96GV9 206 aa16.8■□□□□ 0.28
SMURF1-202ENST00000361368 TMEM95Q3KNT9 176 aa16.8■□□□□ 0.28
SMURF1-202ENST00000361368 TMEM178BH3BS89 294 aa16.79■□□□□ 0.28
SMURF1-202ENST00000361368 PSCAO43653 123 aa16.79■□□□□ 0.28
SMURF1-202ENST00000361368 CDK2AP2O75956 126 aa16.79■□□□□ 0.28
SMURF1-202ENST00000361368 USMG5Q96IX5 58 aa16.79■□□□□ 0.28
SMURF1-202ENST00000361368 LINC00614P0C842 121 aa16.79■□□□□ 0.28
SMURF1-202ENST00000361368 FLVCR1-AS1Q8TAF5 88 aa16.79■□□□□ 0.28
SMURF1-202ENST00000361368 IGKV1-9A0A0C4DH69 117 aa16.79■□□□□ 0.28
SMURF1-202ENST00000361368 LINC00158P58513 81 aa16.79■□□□□ 0.28
SMURF1-202ENST00000361368 TEX38Q6PEX7 206 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms