RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PPP5CP53041 499 aa15.25■□□□□ 0.03
CD47-202ENST00000361309 PVRIGQ6DKI7 326 aa15.25■□□□□ 0.03
CD47-202ENST00000361309 SLC35G3Q8N808 338 aa15.25■□□□□ 0.03
CD47-202ENST00000361309 METTL26Q96S19 204 aa15.25■□□□□ 0.03
CD47-202ENST00000361309 RNF126Q9BV68 326 aa15.25■□□□□ 0.03
CD47-202ENST00000361309 MRPL36Q9P0J6 103 aaKnown RBP15.25■□□□□ 0.03
CD47-202ENST00000361309 PKD1P98161 4303 aa15.24■□□□□ 0.03
CD47-202ENST00000361309 CRYBB3P26998 211 aa15.24■□□□□ 0.03
CD47-202ENST00000361309 RPS19P39019 145 aaKnown RBP15.24■□□□□ 0.03
CD47-202ENST00000361309 UCP3P55916 312 aa15.24■□□□□ 0.03
CD47-202ENST00000361309 ACTL10Q5JWF8 245 aa15.24■□□□□ 0.03
CD47-202ENST00000361309 GPX8Q8TED1 209 aa15.24■□□□□ 0.03
CD47-202ENST00000361309 Q9H521 79 aa15.24■□□□□ 0.03
CD47-202ENST00000361309 TBC1D24Q9ULP9 559 aa15.24■□□□□ 0.03
CD47-202ENST00000361309 CELA1Q9UNI1 258 aa15.24■□□□□ 0.03
CD47-202ENST00000361309 INS-IGF2F8WCM5 200 aa15.23■□□□□ 0.03
CD47-202ENST00000361309 IGKV1-5P01602 117 aa15.23■□□□□ 0.03
CD47-202ENST00000361309 RNASE2P10153 161 aaKnown RBP15.23■□□□□ 0.03
CD47-202ENST00000361309 ZNF767PQ75MW2 155 aa15.23■□□□□ 0.03
CD47-202ENST00000361309 CSNK1G2-AS1Q8NCQ2 148 aa15.23■□□□□ 0.03
CD47-202ENST00000361309 DCANP1Q8TF63 244 aa15.23■□□□□ 0.03
CD47-202ENST00000361309 TMEM230Q96A57 120 aa15.23■□□□□ 0.03
CD47-202ENST00000361309 DYNC1H1Q14204 4646 aaKnown RBP15.23■□□□□ 0.03
CD47-202ENST00000361309 DEFB131BA0A096LNP1 70 aa15.22■□□□□ 0.03
CD47-202ENST00000361309 A0A0B4J293 547 aa15.22■□□□□ 0.03
CD47-202ENST00000361309 CORTO00230 105 aa15.22■□□□□ 0.03
CD47-202ENST00000361309 CLN5O75503 358 aa15.22■□□□□ 0.03
CD47-202ENST00000361309 IFNA17P01571 189 aa15.22■□□□□ 0.03
CD47-202ENST00000361309 SUB1P53999 127 aaKnown RBP eCLIP15.22■□□□□ 0.032e-7■□□□□ 11.2
CD47-202ENST00000361309 MLANAQ16655 118 aa15.22■□□□□ 0.03
CD47-202ENST00000361309 C12orf74Q32Q52 190 aa15.22■□□□□ 0.03
CD47-202ENST00000361309 FNDC4Q9H6D8 234 aaPredicted RBP15.22■□□□□ 0.03
CD47-202ENST00000361309 AMBPP02760 352 aa15.21■□□□□ 0.03
CD47-202ENST00000361309 P0C879 139 aa15.21■□□□□ 0.03
CD47-202ENST00000361309 OPRK1P41145 380 aa15.21■□□□□ 0.03
CD47-202ENST00000361309 ETV6P41212 452 aa15.21■□□□□ 0.03
CD47-202ENST00000361309 POM121L12Q8N7R1 296 aa15.21■□□□□ 0.03
CD47-202ENST00000361309 OR4X1Q8NH49 305 aa15.21■□□□□ 0.03
CD47-202ENST00000361309 NARS2Q96I59 477 aaKnown RBP15.21■□□□□ 0.03
CD47-202ENST00000361309 DNAH11Q96DT5 4516 aa15.2■□□□□ 0.02
CD47-202ENST00000361309 PRSS29PA6NIE9 313 aa15.2■□□□□ 0.02
CD47-202ENST00000361309 MED14OSP0DP75 135 aa15.2■□□□□ 0.02
CD47-202ENST00000361309 AKR1C2P52895 323 aa15.2■□□□□ 0.02
CD47-202ENST00000361309 LSM3P62310 102 aaKnown RBP15.2■□□□□ 0.02
CD47-202ENST00000361309 DHRS2Q13268 280 aa15.2■□□□□ 0.02
CD47-202ENST00000361309 RAB40CQ96S21 281 aa15.2■□□□□ 0.02
CD47-202ENST00000361309 PDCD10Q9BUL8 212 aa15.2■□□□□ 0.02
CD47-202ENST00000361309 M0QYG6 137 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 M0R2N4 97 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 IGKV1-17P01599 117 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 PI3P19957 117 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 RCVRNP35243 200 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 HOXA1P49639 335 aaPredicted RBP15.19■□□□□ 0.02
CD47-202ENST00000361309 RND3P61587 244 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 TIGITQ495A1 244 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 SNX29P2Q8IUI4 249 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 TP53RKQ96S44 253 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 SCRT1Q9BWW7 348 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 SCPEP1Q9HB40 452 aa15.19■□□□□ 0.02
CD47-202ENST00000361309 RTL8CO15255 209 aa15.18■□□□□ 0.02
CD47-202ENST00000361309 SCGB2A1O75556 95 aa15.18■□□□□ 0.02
CD47-202ENST00000361309 P0DMU3 169 aa15.18■□□□□ 0.02
CD47-202ENST00000361309 FAM231AP0DMU4 169 aa15.18■□□□□ 0.02
CD47-202ENST00000361309 FAM231CP0DMU5 169 aa15.18■□□□□ 0.02
CD47-202ENST00000361309 PGAM2P15259 253 aa15.18■□□□□ 0.02
CD47-202ENST00000361309 KCTD21Q4G0X4 260 aa15.18■□□□□ 0.02
CD47-202ENST00000361309 PSMG4Q5JS54 123 aa15.18■□□□□ 0.02
CD47-202ENST00000361309 NDUFAF3Q9BU61 184 aa15.18■□□□□ 0.02
CD47-202ENST00000361309 ENY2Q9NPA8 101 aa15.18■□□□□ 0.02
CD47-202ENST00000361309 SMIM31A0A1B0GVY4 71 aa15.17■□□□□ 0.02
CD47-202ENST00000361309 HELTA6NFD8 242 aa15.17■□□□□ 0.02
CD47-202ENST00000361309 RPL5P46777 297 aaKnown RBP15.17■□□□□ 0.02
CD47-202ENST00000361309 EIF2B2P49770 351 aaKnown RBP15.17■□□□□ 0.02
CD47-202ENST00000361309 PIGPP57054 158 aa15.17■□□□□ 0.02
CD47-202ENST00000361309 COMMD3Q9UBI1 195 aa15.17■□□□□ 0.02
CD47-202ENST00000361309 U3KQE9 123 aa15.17■□□□□ 0.02
CD47-202ENST00000361309 ATP6V1G2O95670 118 aa15.16■□□□□ 0.02
CD47-202ENST00000361309 C16orf54Q6UWD8 224 aa15.16■□□□□ 0.02
CD47-202ENST00000361309 GLMPQ8WWB7 406 aa15.16■□□□□ 0.02
CD47-202ENST00000361309 ZNF486Q96H40 463 aaPredicted RBP15.16■□□□□ 0.02
CD47-202ENST00000361309 XCL2Q9UBD3 114 aa15.16■□□□□ 0.02
CD47-202ENST00000361309 TRAV30A0A087WSZ9 112 aa15.15■□□□□ 0.02
CD47-202ENST00000361309 C3orf85A0A1B0GTC6 90 aa15.15■□□□□ 0.02
CD47-202ENST00000361309 ATG12O94817 140 aa15.15■□□□□ 0.02
CD47-202ENST00000361309 BSXQ3C1V8 233 aa15.15■□□□□ 0.02
CD47-202ENST00000361309 YIPF6Q96EC8 236 aa15.15■□□□□ 0.02
CD47-202ENST00000361309 C1QTNF4Q9BXJ3 329 aa15.15■□□□□ 0.02
CD47-202ENST00000361309 A0A0G2JRQ6 117 aa15.14■□□□□ 0.01
CD47-202ENST00000361309 APOA1P02647 267 aa15.14■□□□□ 0.01
CD47-202ENST00000361309 HNRNPCP07910 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
CD47-202ENST00000361309 NPY1RP25929 384 aa15.14■□□□□ 0.01
CD47-202ENST00000361309 TRIM16LQ309B1 348 aa15.14■□□□□ 0.01
CD47-202ENST00000361309 SP6Q3SY56 376 aa15.14■□□□□ 0.01
CD47-202ENST00000361309 LHFPL1Q86WI0 220 aa15.14■□□□□ 0.01
CD47-202ENST00000361309 IGLC1P0CG04 106 aa15.13■□□□□ 0.01
CD47-202ENST00000361309 AP2S1P53680 142 aaPredicted RBP15.13■□□□□ 0.01
CD47-202ENST00000361309 NUTF2P61970 127 aaKnown RBP15.13■□□□□ 0.01
CD47-202ENST00000361309 Q8WTZ3 238 aa15.13■□□□□ 0.01
CD47-202ENST00000361309 RPS10-NUDT3A0A1W2PQS6 291 aa15.12■□□□□ 0.01
CD47-202ENST00000361309 FAM90A26D6RGX4 464 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms