RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PEMTQ9UBM1 199 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 ERG28Q9UKR5 140 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 CASP8AP2Q9UKL3 1982 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 NCR2O95944 276 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 VDAC2P45880 294 aaPredicted RBP13.4□□□□□ -0.26
COL18A1-203ENST00000359759 CCL20P78556 96 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 VGLL1Q99990 258 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 STRCQ7RTU9 1775 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 IGHV2OR16-5A0A0B4J2B6 119 aa13.4□□□□□ -0.27
COL18A1-203ENST00000359759 PLNP26678 52 aa13.4□□□□□ -0.27
COL18A1-203ENST00000359759 LOXL4Q96JB6 756 aa13.4□□□□□ -0.27
COL18A1-203ENST00000359759 PSG8Q9UQ74 426 aa13.4□□□□□ -0.27
COL18A1-203ENST00000359759 DLEC1Q9Y238 1755 aa13.39□□□□□ -0.27
COL18A1-203ENST00000359759 IGKV2-40A0A087WW87 121 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-203ENST00000359759 IGKV2D-40P01614 121 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-203ENST00000359759 FAM168AQ92567 244 aa13.39□□□□□ -0.27
COL18A1-203ENST00000359759 CTHRC1Q96CG8 243 aa13.39□□□□□ -0.27
COL18A1-203ENST00000359759 ZNF625Q96I27 306 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-203ENST00000359759 TDRD6O60522 2096 aaKnown RBP13.39□□□□□ -0.27
COL18A1-203ENST00000359759 IGHV1-2P23083 117 aa13.39□□□□□ -0.27
COL18A1-203ENST00000359759 NSUN5P1Q3KNT7 163 aa13.39□□□□□ -0.27
COL18A1-203ENST00000359759 PLXNB2O15031 1838 aa13.39□□□□□ -0.27
COL18A1-203ENST00000359759 ASCL2Q99929 193 aa13.39□□□□□ -0.27
COL18A1-203ENST00000359759 GLRXP35754 106 aa13.39□□□□□ -0.27
COL18A1-203ENST00000359759 ARFGEF1Q9Y6D6 1849 aa13.39□□□□□ -0.27
COL18A1-203ENST00000359759 A0A087WV48 116 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 TRAV8-1A0A0A6YYK1 113 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 LTBRP36941 435 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 CHCHD5Q9BSY4 110 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 UPK2O00526 184 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 ZXDCQ2QGD7 858 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-203ENST00000359759 TOMM40O96008 361 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 PSG7Q13046 419 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 ATP5L2Q7Z4Y8 100 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 TNFRSF6BO95407 300 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 ERVK11-1P61568 191 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 RNF125Q96EQ8 232 aa13.38□□□□□ -0.27
COL18A1-203ENST00000359759 CXCL1P09341 107 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 OR9G9P0C7N8 305 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 C1orf53Q5VUE5 145 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 IFI27L1Q96BM0 104 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 LINC00527Q9UJ94 153 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 CHCHD2Q9Y6H1 151 aaPredicted RBP13.37□□□□□ -0.27
COL18A1-203ENST00000359759 hDV102S1A0JD36 115 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 NBR2O15453 112 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 OR9G4Q8NGQ1 327 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 LAMTOR3Q9UHA4 124 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 NPIPB13A6NJU9 1138 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 NPIPB5A8MRT5 1133 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 GAGE2BQ13066 116 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 SLC25A28Q96A46 364 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 CCL1P22362 96 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 CACNG8Q8WXS5 425 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 KNTC1P50748 2209 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 CDK2AP2O75956 126 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 NAPSAO96009 420 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 ZNF124Q15973 351 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 HIST1H2BLQ99880 126 aa13.37□□□□□ -0.27
COL18A1-203ENST00000359759 C15orf61A6NNL5 157 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 EIF4EBP2Q13542 120 aaPredicted RBP13.36□□□□□ -0.27
COL18A1-203ENST00000359759 GNB1LQ9BYB4 327 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 UBE2CO00762 179 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 ZCCHC24Q8N2G6 241 aaKnown RBP13.36□□□□□ -0.27
COL18A1-203ENST00000359759 C1orf162Q8NEQ5 155 aaPredicted RBP13.36□□□□□ -0.27
COL18A1-203ENST00000359759 OR10W1Q8NGF6 305 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 HSD52Q0P140 79 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 TCRBV4S1A1TA0A5B7 111 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 ZNF474Q6S9Z5 364 aaPredicted RBP13.36□□□□□ -0.27
COL18A1-203ENST00000359759 SCRT1Q9BWW7 348 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 CEACAM1P13688 526 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 LAGE3Q14657 143 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 LCNL1Q6ZST4 164 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 PPP1R32Q7Z5V6 425 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 ZIC4Q8N9L1 334 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 GP6Q9HCN6 339 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 A0A087X0K7 114 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 A0A1W2PRE2 83 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 LYNX1G3V0Z9 82 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 SP9P0CG40 484 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 LYNX1P0DP58 116 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 RHOGP84095 191 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
COL18A1-203ENST00000359759 CHCHD1Q96BP2 118 aaKnown RBP13.36□□□□□ -0.27
COL18A1-203ENST00000359759 MTCL1Q9Y4B5 1905 aaKnown RBP13.36□□□□□ -0.27
COL18A1-203ENST00000359759 TMEM8BA6NDV4 472 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 EFNB3Q15768 340 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 ORMDL2Q53FV1 153 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 C1QTNF5Q9BXJ0 243 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 BTCP35070 178 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 FAM57AQ8TBR7 257 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 FOXD3Q9UJU5 478 aaPredicted RBP13.35□□□□□ -0.27
COL18A1-203ENST00000359759 MAJINQ3KP22 176 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 GTSF1LQ9H1H1 148 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 LINC00312Q9Y6C7 94 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 TMEM86BQ8N661 226 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 IMMP1LQ96LU5 166 aa13.35□□□□□ -0.27
COL18A1-203ENST00000359759 GHRHP01286 108 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 D6R8Y8 96 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 PAX4O43316 350 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms