RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 PF4P02776 101 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 TMEM238C9JI98 176 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 J3QRE1 110 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 CD7P09564 240 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 GLRX5Q86SX6 157 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 SEPSECSQ9HD40 501 aaKnown RBP12.12□□□□□ -0.47
NUP98-203ENST00000359171 DEPPQ9NTK1 212 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 TIAF1O95411 115 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 MORN2Q502X0 79 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 TMEM42Q69YG0 159 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 TRGV2A0A075B6R0 118 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 CD55P08174 381 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 SRSF7Q16629 238 aaKnown RBP eCLIP12.12□□□□□ -0.47
NUP98-203ENST00000359171 MORN3Q6PF18 240 aaPredicted RBP12.12□□□□□ -0.47
NUP98-203ENST00000359171 SEC16AO15027 2179 aa12.12□□□□□ -0.47
NUP98-203ENST00000359171 TGFBR3LH3BV60 316 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 VSIRQ9H7M9 311 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 IGHV3OR16-10A0A075B7F0 116 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 SRSF4Q08170 494 aaKnown RBP12.11□□□□□ -0.47
NUP98-203ENST00000359171 LHFPL1Q86WI0 220 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 LY96Q9Y6Y9 160 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 IGHV3OR16-8A0A075B7F1 116 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 DUTP33316 252 aaKnown RBP12.11□□□□□ -0.47
NUP98-203ENST00000359171 HAX1O00165 279 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 CELA3AP09093 270 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 CD28P10747 220 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 M0R2P5 195 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 TREML4Q6UXN2 200 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 LINC01551Q86U37 167 aa12.11□□□□□ -0.47
NUP98-203ENST00000359171 C17orf100A8MU93 164 aa12.1□□□□□ -0.47
NUP98-203ENST00000359171 TMEM86BQ8N661 226 aa12.1□□□□□ -0.47
NUP98-203ENST00000359171 ZNF837Q96EG3 531 aaPredicted RBP12.1□□□□□ -0.47
NUP98-203ENST00000359171 ITGB4P16144 1822 aa12.1□□□□□ -0.47
NUP98-203ENST00000359171 FAM27E3Q08E93 113 aa12.1□□□□□ -0.47
NUP98-203ENST00000359171 BCL6BQ8N143 479 aaPredicted RBP12.1□□□□□ -0.47
NUP98-203ENST00000359171 PEMTQ9UBM1 199 aa12.1□□□□□ -0.47
NUP98-203ENST00000359171 CD300EQ496F6 205 aaPredicted RBP12.1□□□□□ -0.47
NUP98-203ENST00000359171 TRGV11A0A075B6L2 103 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 LYPD3O95274 346 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 ATP1A1-AS1Q5TC04 95 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 C8orf46Q8TAG6 207 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 SIGLEC12Q96PQ1 595 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 RAMP3O60896 148 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 ECM29Q5VYK3 1845 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 OR9G9P0C7N8 305 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 LYZL4Q96KX0 146 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 GFI1Q99684 422 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 PYY3Q5JQD4 70 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 ACTL10Q5JWF8 245 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 REG4Q9BYZ8 158 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 PRR32B1ATL7 298 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 OVOL1O14753 267 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 LAGE3Q14657 143 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 TMEM167AQ8TBQ9 72 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 TMEM133Q9H2Q1 129 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 SCN3AQ9NY46 2000 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 CRPP02741 224 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 LINC01560Q8TB33 94 aa12.09□□□□□ -0.47
NUP98-203ENST00000359171 IGKV1D-8A0A087WSZ0 117 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 IGHV1-2P23083 117 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 GGTLC1Q9BX51 225 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 UMODP07911 640 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 CCL3L1P16619 93 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 MALP21145 153 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 UBE2V1Q13404 147 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 AGMATQ9BSE5 352 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 MRPL27Q9P0M9 148 aaKnown RBP12.08□□□□□ -0.48
NUP98-203ENST00000359171 SSBP2P81877 361 aaPredicted RBP12.08□□□□□ -0.48
NUP98-203ENST00000359171 USP54Q70EL1 1684 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 PLEKHB2Q96CS7 222 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 PHLDA1Q8WV24 401 aaPredicted RBP12.08□□□□□ -0.48
NUP98-203ENST00000359171 IMMP1LQ96LU5 166 aa12.08□□□□□ -0.48
NUP98-203ENST00000359171 KLF17Q5JT82 389 aaPredicted RBP12.07□□□□□ -0.48
NUP98-203ENST00000359171 CRIM1Q9NZV1 1036 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 IGLV3-32A0A0A0MS00 114 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 A0A0A6YYD4 124 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 GUSBP1Q15486 140 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 TNFRSF14Q92956 283 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 MGST2Q99735 147 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 GFRA3O60609 400 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 RPRMLQ8N4K4 120 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 CCL19Q99731 98 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 IGKV3D-20A0A0C4DH25 116 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 PRR19A6NJB7 356 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 RHOGP84095 191 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 FDCSPQ8NFU4 85 aa12.07□□□□□ -0.48
NUP98-203ENST00000359171 IGHV3-11P01762 117 aa12.06□□□□□ -0.48
NUP98-203ENST00000359171 C3orf79P0CE67 100 aa12.06□□□□□ -0.48
NUP98-203ENST00000359171 BSPH1Q075Z2 132 aa12.06□□□□□ -0.48
NUP98-203ENST00000359171 GTSCR1Q86UQ5 136 aa12.06□□□□□ -0.48
NUP98-203ENST00000359171 LGALS1P09382 135 aaKnown RBP12.06□□□□□ -0.48
NUP98-203ENST00000359171 EVI2AP22794 236 aa12.06□□□□□ -0.48
NUP98-203ENST00000359171 S100A7L2Q5SY68 101 aa12.06□□□□□ -0.48
NUP98-203ENST00000359171 DLX4Q92988 240 aaPredicted RBP12.06□□□□□ -0.48
NUP98-203ENST00000359171 MPV17L2Q567V2 206 aa12.06□□□□□ -0.48
NUP98-203ENST00000359171 RPP25LQ8N5L8 163 aaKnown RBP12.06□□□□□ -0.48
NUP98-203ENST00000359171 SUPT4H1P63272 117 aaKnown RBP12.05□□□□□ -0.48
NUP98-203ENST00000359171 SPANXA1Q9NS26 97 aa12.05□□□□□ -0.48
NUP98-203ENST00000359171 PPIFP30405 207 aaKnown RBP12.05□□□□□ -0.48
NUP98-203ENST00000359171 GAS1P54826 345 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms