RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 LINC00527Q9UJ94 153 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 DSCR9P59020 149 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 RIPPLY2Q5TAB7 128 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 FAM166AQ6J272 317 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 IGHV2OR16-5A0A0B4J2B6 119 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 H3BUT2 72 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 HLA-DQB1P01920 261 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 ZP1P60852 638 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 RBMY1FQ15415 496 aaKnown RBP8.54□□□□□ -1.04
CLIP1-202ENST00000358808 SIGLEC15Q6ZMC9 328 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 MIR17HGQ75NE6 70 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 COQ2Q96H96 371 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 CCL1P22362 96 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 PAX8Q06710 450 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 TMEM105Q8N8V8 129 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 NIT1Q86X76 327 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 IGLV1-36A0A0B4J1U3 117 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 IGKV1-8A0A0C4DH67 115 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 DPM2O94777 84 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 CELA3AP09093 270 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 GATA2P23769 480 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-202ENST00000358808 ZXDCQ2QGD7 858 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-202ENST00000358808 Q5PR19 223 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 TMEM8BA6NDV4 472 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 C17orf100A8MU93 164 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 C12orf77C9JDV5 145 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 TMEM155Q4W5P6 130 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 LINC00312Q9Y6C7 94 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 CKAP5Q14008 2032 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 RPL36AP83881 106 aaKnown RBP8.53□□□□□ -1.04
CLIP1-202ENST00000358808 C6orf226Q5I0X4 101 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 RPL36ALQ969Q0 106 aaKnown RBP8.53□□□□□ -1.04
CLIP1-202ENST00000358808 ZNF625Q96I27 306 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-202ENST00000358808 TRBV5-5A0A0J9YX44 114 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 LINC00587B1AMM8 73 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 J3QW42 95 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 CLPSP04118 112 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 C1QL2Q7Z5L3 287 aa8.53□□□□□ -1.04
CLIP1-202ENST00000358808 MRPS18AQ9NVS2 196 aaKnown RBP8.53□□□□□ -1.04
CLIP1-202ENST00000358808 IZUMO1RA6ND01 250 aa8.52□□□□□ -1.04
CLIP1-202ENST00000358808 OVOL1O14753 267 aa8.52□□□□□ -1.04
CLIP1-202ENST00000358808 KLF4O43474 513 aa8.52□□□□□ -1.04
CLIP1-202ENST00000358808 ORMDL2Q53FV1 153 aa8.52□□□□□ -1.04
CLIP1-202ENST00000358808 PVRIGQ6DKI7 326 aa8.52□□□□□ -1.04
CLIP1-202ENST00000358808 ZNF600Q6ZNG1 722 aa8.52□□□□□ -1.04
CLIP1-202ENST00000358808 DEFB104AQ8WTQ1 72 aa8.52□□□□□ -1.04
CLIP1-202ENST00000358808 TRPM6Q9BX84 2022 aa8.52□□□□□ -1.04
CLIP1-202ENST00000358808 A0A1W2PR77 199 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 C17orf98A8MV24 154 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 CCL3L1P16619 93 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 CD300EQ496F6 205 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-202ENST00000358808 APCDD1LQ8NCL9 501 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 RNF125Q96EQ8 232 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 C5orf30Q96GV9 206 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 GGACTQ9BVM4 153 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 ITGB1BP1O14713 200 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 C5orf66Q9H5L9 145 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 THSD7BQ9C0I4 1608 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 TRAV41A0A0B4J266 112 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 Q5BKY6 102 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 DOPEY2Q9Y3R5 2298 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 MGAMO43451 1857 aa8.52□□□□□ -1.05
CLIP1-202ENST00000358808 HIGD1CA8MV81 97 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 LYNX1G3V0Z9 82 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 LYNX1P0DP58 116 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 ACTL10Q5JWF8 245 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 ASPHD2Q6ICH7 369 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 RASL10AQ92737 203 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 DLX4Q92988 240 aaPredicted RBP8.51□□□□□ -1.05
CLIP1-202ENST00000358808 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 UMODP07911 640 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 ERCC8Q13216 396 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 POC1AQ8NBT0 407 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 SLC25A38Q96DW6 304 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 WDYHV1Q96HA8 205 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 RFPL3SP0C7P2 107 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 UBE2E2Q96LR5 201 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 KLF12Q9Y4X4 402 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 MYO16Q9Y6X6 1858 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 ARID2Q68CP9 1835 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 TIAF1O95411 115 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 IGKCP01834 107 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 DANCRP0C864 163 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 ATP5G3P48201 142 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 PCP4P48539 62 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 SS18Q15532 418 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 GTF3AQ92664 365 aaKnown RBP8.51□□□□□ -1.05
CLIP1-202ENST00000358808 FNDC4Q9H6D8 234 aaPredicted RBP8.51□□□□□ -1.05
CLIP1-202ENST00000358808 RNF114Q9Y508 228 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 A8MWV9 139 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 PRB4P10163 310 aaPredicted RBP8.51□□□□□ -1.05
CLIP1-202ENST00000358808 IMMP1LQ96LU5 166 aa8.51□□□□□ -1.05
CLIP1-202ENST00000358808 ZNF114Q8NC26 417 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 MEGF9Q9H1U4 602 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 IGHV1-2P23083 117 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 TMEM219Q86XT9 240 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 OR9G9P0C7N8 305 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 ZNF876PQ49A33 203 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 C1orf100Q5SVJ3 147 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms