RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 OSTCQ9NRP0 149 aa6.96□□□□□ -1.3
RFX3-202ENST00000358730 SERTAD4Q9NUC0 356 aa6.96□□□□□ -1.3
RFX3-202ENST00000358730 PSMB11A5LHX3 300 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 ISLRO14498 428 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 NDUFB3O43676 98 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 PPOXP50336 477 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 PAFAH1B2P68402 229 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 CX3CL1P78423 397 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 LRRC10Q5BKY1 277 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 LYPD2Q6UXB3 125 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 PDPNQ86YL7 162 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 TMEM167AQ8TBQ9 72 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 IGF2BP2-AS1Q96M15 143 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 TBX15Q96SF7 602 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 RNF2Q99496 336 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 HSPB9Q9BQS6 159 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 FNDC4Q9H6D8 234 aaPredicted RBP6.95□□□□□ -1.3
RFX3-202ENST00000358730 ZNF430Q9H8G1 570 aaPredicted RBP6.95□□□□□ -1.3
RFX3-202ENST00000358730 DNAJC4Q9NNZ3 241 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 ZNF355PQ9NSJ1 428 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 CBLN4Q9NTU7 201 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 TMEM106BQ9NUM4 274 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 KIR2DL5BA0A0G2JN68 375 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 KIR2DL5BA0A0G2JPC4 375 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 CGB1A6NKQ9 187 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 EREGO14944 169 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 IGLV2-8P01709 118 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 MT-ND6P03923 174 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 PYYP10082 97 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 WDR73Q6P4I2 378 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 KIR2DL5AQ8N109 375 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 NPIPB3Q92617 1050 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 WASHC3Q9Y3C0 194 aa6.95□□□□□ -1.3
RFX3-202ENST00000358730 BSNQ9UPA5 3926 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 PIEZO2Q9H5I5 2752 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 INS-IGF2F8WCM5 200 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 SLC25A17O43808 307 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 REG1AP05451 166 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 THBDP07204 575 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 ESDP10768 282 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 BPIFB3P59826 476 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 C1orf194Q5T5A4 169 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 C10orf113Q5VZT2 155 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 MRPL54Q6P161 138 aaKnown RBP6.94□□□□□ -1.3
RFX3-202ENST00000358730 TGIF2LXQ8IUE1 241 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 OR4A5Q8NH83 315 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 TMEM186Q96B77 213 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 TPSG1Q9NRR2 321 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 CTSZQ9UBR2 303 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 CA1P00915 261 aaPredicted RBP6.94□□□□□ -1.3
RFX3-202ENST00000358730 SUB1P53999 127 aaKnown RBP eCLIP6.94□□□□□ -1.3
RFX3-202ENST00000358730 FAM71F2Q6NXP2 309 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 OR1L4Q8NGR5 311 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 LINC00479Q96M42 142 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 PAXXQ9BUH6 204 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 GNB4Q9HAV0 340 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 CDC42EP3Q9UKI2 254 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 DMXL2Q8TDJ6 3036 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 KALRNO60229 2985 aa6.94□□□□□ -1.3
RFX3-202ENST00000358730 TCRBV4S1A1TA0A5B7 111 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 PLAUP00749 431 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 IGLV2-23P01705 113 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 CDKN1AP38936 164 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 SSTP61278 116 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 Q0VG73 95 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 KIAA1644Q3SXP7 199 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 VMA21Q3ZAQ7 101 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 ASPHD1Q5U4P2 390 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 TMEM136Q6ZRR5 245 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 DYNLRB1Q9NP97 96 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 AMMECR1Q9Y4X0 333 aaPredicted RBP6.93□□□□□ -1.3
RFX3-202ENST00000358730 ZFHX2Q9C0A1 2572 aaPredicted RBP6.93□□□□□ -1.3
RFX3-202ENST00000358730 IGKV1D-37A0A075B6S9 117 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 A0A1W2PPI3 338 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 AMY1AP04745 511 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 LOXP28300 417 aaPredicted RBP6.93□□□□□ -1.3
RFX3-202ENST00000358730 TDGF1P3P51864 188 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 TPTE2P1Q5T6R2 138 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 DMRTC2Q8IXT2 367 aaPredicted RBP6.93□□□□□ -1.3
RFX3-202ENST00000358730 ST6GALNAC6Q969X2 333 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 MRPL36Q9P0J6 103 aaKnown RBP6.93□□□□□ -1.3
RFX3-202ENST00000358730 SPTBN2O15020 2390 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 DCHS1Q96JQ0 3298 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 IGHV3-72A0A0B4J1Y9 119 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 SMIM27A0A1W2PRY6 76 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 PEX7O00628 323 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 ENSAO43768 121 aaKnown RBP6.93□□□□□ -1.3
RFX3-202ENST00000358730 MOSP00540 346 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 GFRALQ6UXV0 394 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 PATE2Q6UY27 113 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 LINC00311Q8N616 119 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 SIGLECL1Q8N7X8 197 aa6.93□□□□□ -1.3
RFX3-202ENST00000358730 FAM103A1Q9BTL3 118 aaKnown RBP6.93□□□□□ -1.3
RFX3-202ENST00000358730 APC2O95996 2303 aa6.92□□□□□ -1.3
RFX3-202ENST00000358730 TRAV34A0A0B4J273 112 aa6.92□□□□□ -1.3
RFX3-202ENST00000358730 HLA-DQA1P01909 254 aa6.92□□□□□ -1.3
RFX3-202ENST00000358730 BRS3P32247 399 aa6.92□□□□□ -1.3
RFX3-202ENST00000358730 COX19Q49B96 90 aa6.92□□□□□ -1.3
RFX3-202ENST00000358730 ASCL5Q7RTU5 278 aa6.92□□□□□ -1.3
RFX3-202ENST00000358730 LINC00305Q7Z4B0 112 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms