RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SLC16A13Q7RTY0 426 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 STX12Q86Y82 276 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 ZNF502Q8TBZ5 544 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 DCUN1D4Q92564 292 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 CCDC140Q96MF4 163 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 RANGRFQ9HD47 186 aaPredicted RBP11.79□□□□□ -0.52
TPM1-206ENST00000358278 TRAV14DV4A0A0A6YYC5 116 aa11.78□□□□□ -0.52
TPM1-206ENST00000358278 GPR183P32249 361 aa11.78□□□□□ -0.52
TPM1-206ENST00000358278 P2RY1P47900 373 aa11.78□□□□□ -0.52
TPM1-206ENST00000358278 MFAP4P55083 255 aa11.78□□□□□ -0.52
TPM1-206ENST00000358278 RUNX1Q01196 453 aa11.78□□□□□ -0.52
TPM1-206ENST00000358278 OR10P1Q8NGE3 313 aa11.78□□□□□ -0.52
TPM1-206ENST00000358278 RNF126Q9BV68 326 aa11.78□□□□□ -0.52
TPM1-206ENST00000358278 PEF1Q9UBV8 284 aaKnown RBP11.78□□□□□ -0.52
TPM1-206ENST00000358278 TRRAPQ9Y4A5 3859 aa11.78□□□□□ -0.52
TPM1-206ENST00000358278 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.52
TPM1-206ENST00000358278 OR2T8A6NH00 312 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 CCNKO75909 580 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 CST7O76096 145 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 SCAF4O95104 1147 aaKnown RBP11.77□□□□□ -0.52
TPM1-206ENST00000358278 SLC25A4P12235 298 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 MLANAQ16655 118 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 TMEM252Q8N6L7 170 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 OR11H1Q8NG94 326 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 OR4F17Q8NGA8 305 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 DPF1Q92782 380 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 SLC35E1Q96K37 410 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 DUX3Q96PT4 197 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 OR4F4Q96R69 305 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 SLC25A31Q9H0C2 315 aa11.77□□□□□ -0.52
TPM1-206ENST00000358278 IGSF23A1L1A6 192 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 PPP5D1E7EU14 171 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 M0QZ24 198 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 GNG7O60262 68 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 TRBV12-3P01733 135 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 CLEC3BP05452 202 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 GPX4P36969 197 aaPredicted RBP11.77□□□□□ -0.53
TPM1-206ENST00000358278 NPBWR1P48145 328 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 ACOT7LQ6ZUV0 252 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 TMEM217Q8N7C4 229 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 CACNG8Q8WXS5 425 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 ACY3Q96HD9 319 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 ZC4H2Q9NQZ6 224 aa11.77□□□□□ -0.53
TPM1-206ENST00000358278 GAR1Q9NY12 217 aaKnown RBP11.77□□□□□ -0.53
TPM1-206ENST00000358278 IGHV4OR15-8A0A075B7B6 117 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 A0A087WW49 117 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 FXYD6-FXYD2A0A087WZ82 144 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 PRSS46E5RG02 174 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 CCL24O00175 119 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 PF4P02776 101 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 HSPB1P04792 205 aaKnown RBP11.76□□□□□ -0.53
TPM1-206ENST00000358278 ARL3P36405 182 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 SULT1A1P50225 295 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 RND2P52198 227 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 HBG1P69891 147 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 HBG2P69892 147 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 ZNF616Q08AN1 781 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 Q5BKY6 102 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 AKAP14Q86UN6 197 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 OR1N2Q8NGR9 330 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 SPATA3Q8NHX4 192 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 BSCL2Q96G97 398 aaPredicted RBP11.76□□□□□ -0.53
TPM1-206ENST00000358278 RAX2Q96IS3 184 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 ATP6V0BQ99437 205 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 TXN2Q99757 166 aa11.76□□□□□ -0.53
TPM1-206ENST00000358278 PKD1L1Q8TDX9 2849 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 SMCO3A2RU48 225 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 PMS2P5A8MQ11 134 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 LINC01619G3V211 115 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 SMLR1H3BR10 107 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 TGOLN2O43493 480 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 SCGB2A1O75556 95 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 LYL1P12980 280 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 FCGR2BP31994 310 aaPredicted RBP11.75□□□□□ -0.53
TPM1-206ENST00000358278 EWSR1Q01844 656 aaKnown RBP eCLIP11.75□□□□□ -0.53
TPM1-206ENST00000358278 SLC38A11Q08AI6 406 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 LILRB2Q8N423 598 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 TMEM116Q8NCL8 245 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 OR4X1Q8NH49 305 aa11.75□□□□□ -0.53
TPM1-206ENST00000358278 MRPL36Q9P0J6 103 aaKnown RBP11.75□□□□□ -0.53
TPM1-206ENST00000358278 F8W735 103 aaPredicted RBP11.74□□□□□ -0.53
TPM1-206ENST00000358278 NUPL2O15504 423 aaKnown RBP11.74□□□□□ -0.53
TPM1-206ENST00000358278 RPL12P30050 165 aaKnown RBP11.74□□□□□ -0.53
TPM1-206ENST00000358278 NUP62P37198 522 aaPredicted RBP11.74□□□□□ -0.53
TPM1-206ENST00000358278 AKR1C1Q04828 323 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 BAXQ07812 192 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 GAMTQ14353 236 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 RPEL1Q2QD12 228 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 SPSB3Q6PJ21 355 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 HAPLN4Q86UW8 402 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 ST6GAL2Q96JF0 529 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 BMPR1BO00238 502 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 GGCTO75223 188 aaKnown RBP11.74□□□□□ -0.53
TPM1-206ENST00000358278 CLN5O75503 358 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 ZP3P21754 424 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 DLK1P80370 383 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 NHLH2Q02577 135 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 ARL16Q0P5N6 197 aa11.74□□□□□ -0.53
TPM1-206ENST00000358278 G3V3Q6 166 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms