RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 HIPK2Q9H2X6 1198 aa15.32■□□□□ 0.04
PPP1CA-202ENST00000358239 EDA2RQ9HAV5 297 aa15.32■□□□□ 0.04
PPP1CA-202ENST00000358239 SMPXQ9UHP9 88 aa15.32■□□□□ 0.04
PPP1CA-202ENST00000358239 IGHV3OR16-8A0A075B7F1 116 aa15.31■□□□□ 0.04
PPP1CA-202ENST00000358239 TRAV14DV4A0A0A6YYC5 116 aa15.31■□□□□ 0.04
PPP1CA-202ENST00000358239 OR4C46A6NHA9 309 aa15.31■□□□□ 0.04
PPP1CA-202ENST00000358239 AKR1C4P17516 323 aa15.31■□□□□ 0.04
PPP1CA-202ENST00000358239 BMI1P35226 326 aa15.31■□□□□ 0.04
PPP1CA-202ENST00000358239 OPRK1P41145 380 aa15.31■□□□□ 0.04
PPP1CA-202ENST00000358239 TMEM116Q8NCL8 245 aa15.31■□□□□ 0.04
PPP1CA-202ENST00000358239 GPR146Q96CH1 333 aa15.31■□□□□ 0.04
PPP1CA-202ENST00000358239 ZNF414Q96IQ9 312 aa15.31■□□□□ 0.04
PPP1CA-202ENST00000358239 HEYLQ9NQ87 328 aaPredicted RBP15.31■□□□□ 0.04
PPP1CA-202ENST00000358239 A0A0B4J2A0 478 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 ZNF207O43670 478 aaKnown RBP15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 CD5P06127 495 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 SULT1A3P0DMM9 295 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 SULT1A4P0DMN0 295 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 ZNF79Q15937 498 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 SPANXN2Q5MJ10 180 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 ZNF600Q6ZNG1 722 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 CCDC190Q86UF4 302 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 FAM110AQ9BQ89 295 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 RHPN1-AS1Q9BWJ2 59 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 SHPKQ9UHJ6 478 aa15.3■□□□□ 0.04
PPP1CA-202ENST00000358239 LOC102724200A0A096LPH7 203 aaPredicted RBP15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 RPS10-NUDT3A0A1W2PQS6 291 aa15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 CHEK1O14757 476 aa15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 CLN5O75503 358 aa15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 TMEM50AO95807 157 aa15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 SUPT4H1P63272 117 aaKnown RBP15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 CASC10Q5T4H9 136 aa15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 SLC24A4Q8NFF2 622 aa15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 OR4X1Q8NH49 305 aa15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 SLC25A21Q9BQT8 299 aaPredicted RBP15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 GGTLC1Q9BX51 225 aa15.29■□□□□ 0.04
PPP1CA-202ENST00000358239 TRAV30A0A087WSZ9 112 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 CEBPZOSA8MTT3 80 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 LYL1P12980 280 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 CCR6P51684 374 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 C2orf83Q53S99 150 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 TMEM128Q5BJH2 165 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 TOMM20LQ6UXN7 152 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 NOXA1Q86UR1 476 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 LGI3Q8N145 548 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 RNASEH2CQ8TDP1 164 aaKnown RBP15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 RNF2Q99496 336 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 FNDC4Q9H6D8 234 aaPredicted RBP15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 CSMD3Q7Z407 3707 aa15.28■□□□□ 0.04
PPP1CA-202ENST00000358239 TENM2Q9NT68 2774 aa15.27■□□□□ 0.04
PPP1CA-202ENST00000358239 DUXBA0A1W2PPF3 345 aa15.27■□□□□ 0.04
PPP1CA-202ENST00000358239 NMSQ5H8A3 153 aa15.27■□□□□ 0.04
PPP1CA-202ENST00000358239 PUS1Q9Y606 427 aaKnown RBP eCLIP15.27■□□□□ 0.04
PPP1CA-202ENST00000358239 SLC25A4P12235 298 aa15.26■□□□□ 0.03
PPP1CA-202ENST00000358239 CMC4P56277 68 aaPredicted RBP15.26■□□□□ 0.03
PPP1CA-202ENST00000358239 SMCO1Q147U7 214 aa15.26■□□□□ 0.03
PPP1CA-202ENST00000358239 ETFRF1Q6IPR1 90 aa15.26■□□□□ 0.03
PPP1CA-202ENST00000358239 TMED4Q7Z7H5 227 aa15.26■□□□□ 0.03
PPP1CA-202ENST00000358239 ZFAND3Q9H8U3 227 aa15.26■□□□□ 0.03
PPP1CA-202ENST00000358239 PRR13Q9NZ81 148 aa15.26■□□□□ 0.03
PPP1CA-202ENST00000358239 TNFRSF9Q07011 255 aa15.25■□□□□ 0.03
PPP1CA-202ENST00000358239 ODF3L2Q3SX64 289 aa15.25■□□□□ 0.03
PPP1CA-202ENST00000358239 TMEM231Q9H6L2 316 aa15.25■□□□□ 0.03
PPP1CA-202ENST00000358239 VSIRQ9H7M9 311 aa15.25■□□□□ 0.03
PPP1CA-202ENST00000358239 RETNQ9HD89 108 aa15.25■□□□□ 0.03
PPP1CA-202ENST00000358239 HSPB7Q9UBY9 170 aa15.25■□□□□ 0.03
PPP1CA-202ENST00000358239 A0A1B0GU03 582 aa15.24■□□□□ 0.03
PPP1CA-202ENST00000358239 NPY1RP25929 384 aa15.24■□□□□ 0.03
PPP1CA-202ENST00000358239 APOC4P55056 127 aa15.24■□□□□ 0.03
PPP1CA-202ENST00000358239 PAFAH1B2P68402 229 aa15.24■□□□□ 0.03
PPP1CA-202ENST00000358239 FAM90A2PQ658T7 463 aa15.24■□□□□ 0.03
PPP1CA-202ENST00000358239 LYZL2Q7Z4W2 148 aa15.24■□□□□ 0.03
PPP1CA-202ENST00000358239 SRRQ9GZT4 340 aa15.24■□□□□ 0.03
PPP1CA-202ENST00000358239 MRPL36Q9P0J6 103 aaKnown RBP15.24■□□□□ 0.03
PPP1CA-202ENST00000358239 UBQLN2Q9UHD9 624 aa15.24■□□□□ 0.03
PPP1CA-202ENST00000358239 U3KQ87 197 aa15.24■□□□□ 0.03
PPP1CA-202ENST00000358239 RYR3Q15413 4870 aa15.23■□□□□ 0.03
PPP1CA-202ENST00000358239 IGHV3-49A0A0A0MS15 119 aa15.23■□□□□ 0.03
PPP1CA-202ENST00000358239 A0A1W2PS18 150 aa15.23■□□□□ 0.03
PPP1CA-202ENST00000358239 ATP5IP56385 69 aaPredicted RBP15.23■□□□□ 0.03
PPP1CA-202ENST00000358239 LRTM2Q8N967 370 aa15.23■□□□□ 0.03
PPP1CA-202ENST00000358239 IL17DQ8TAD2 202 aa15.23■□□□□ 0.03
PPP1CA-202ENST00000358239 METTL26Q96S19 204 aa15.23■□□□□ 0.03
PPP1CA-202ENST00000358239 NPPCP23582 126 aa15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 VAMP1P23763 118 aa15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 INPP1P49441 399 aa15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 RBMS2Q15434 407 aaKnown RBP15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 MLANAQ16655 118 aa15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 PRSS54Q6PEW0 395 aa15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 TCF24Q7RTU0 167 aa15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 OR1S2Q8NGQ3 325 aa15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 OR1S1Q8NH92 325 aa15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 DTD1Q8TEA8 209 aa15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 ST8SIA2Q92186 375 aa15.22■□□□□ 0.03
PPP1CA-202ENST00000358239 IGHV3OR16-13A0A075B7E8 117 aa15.21■□□□□ 0.03
PPP1CA-202ENST00000358239 IGHV3-74A0A0B4J1X5 117 aa15.21■□□□□ 0.03
PPP1CA-202ENST00000358239 KIR2DL5BA0A0G2JN68 375 aa15.21■□□□□ 0.03
PPP1CA-202ENST00000358239 KIR2DL5BA0A0G2JPC4 375 aa15.21■□□□□ 0.03
PPP1CA-202ENST00000358239 NAP1L6A6NFF2 107 aa15.21■□□□□ 0.03
PPP1CA-202ENST00000358239 UBE2CO00762 179 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms