RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 YPEL3P61236 119 aaPredicted RBP7.25□□□□□ -1.25
UPF2-202ENST00000357604 UBE2L3P68036 154 aaKnown RBP7.25□□□□□ -1.25
UPF2-202ENST00000357604 DYNAPQ8N1N2 210 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 OR10W1Q8NGF6 305 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 RNF125Q96EQ8 232 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 EIF5A2Q9GZV4 153 aaKnown RBP7.25□□□□□ -1.25
UPF2-202ENST00000357604 RPRMQ9NS64 109 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 TRAV3A0A0B4J244 114 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 TRAV25A0A0B4J276 109 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 HMSDA8MTL9 139 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 IGKV1-5P01602 117 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 AKR1C3P42330 323 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 SUPT4H1P63272 117 aaKnown RBP7.25□□□□□ -1.25
UPF2-202ENST00000357604 PAXXQ9BUH6 204 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 ZNF705EA8MWA4 302 aaPredicted RBP7.25□□□□□ -1.25
UPF2-202ENST00000357604 SYNJ2BPP57105 145 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 TCF24Q7RTU0 167 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 TCTE3Q8IZS6 198 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 OR4D5Q8NGN0 318 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 WDR89Q96FK6 387 aaPredicted RBP7.25□□□□□ -1.25
UPF2-202ENST00000357604 HSPB9Q9BQS6 159 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 CHRDL1Q9BU40 450 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 OR2C1O95371 312 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 SLC25A5P05141 298 aaKnown RBP7.24□□□□□ -1.25
UPF2-202ENST00000357604 PAX6P26367 422 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 SPATA31B1PQ5VZV4 182 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 LCN15Q6UWW0 184 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 C5orf24Q7Z6I8 188 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 PUS1Q9Y606 427 aaKnown RBP eCLIP7.24□□□□□ -1.25
UPF2-202ENST00000357604 OR11H12B2RN74 326 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 C1QBP02746 253 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 H2AFB1P0C5Y9 115 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 RNASE2P10153 161 aaKnown RBP7.24□□□□□ -1.25
UPF2-202ENST00000357604 SERF2P84101 59 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 C10orf55Q5SWW7 151 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 C8orf86Q6ZUL3 223 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 A0A0B4J293 547 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 TMEM95Q3KNT9 176 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 TMEM252Q8N6L7 170 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 GATAD1Q8WUU5 269 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 OR10C1Q96KK4 312 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 INS-IGF2F8WCM5 200 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 ZNF345Q14585 488 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 PEA15Q15121 130 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 LGALSLQ3ZCW2 172 aaPredicted RBP7.24□□□□□ -1.25
UPF2-202ENST00000357604 RPUSD4Q96CM3 377 aaKnown RBP7.24□□□□□ -1.25
UPF2-202ENST00000357604 C1QTNF4Q9BXJ3 329 aa7.24□□□□□ -1.25
UPF2-202ENST00000357604 FBLL1A6NHQ2 334 aaKnown RBP7.23□□□□□ -1.25
UPF2-202ENST00000357604 CRYGCP07315 174 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 OR10J4P0C629 311 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 CTRB1P17538 263 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 PJVKQ0ZLH3 352 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 OPCMLQ14982 345 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 CTRB2Q6GPI1 263 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 BLNKQ8WV28 456 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 S4R3C0 116 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 TPRP12270 2363 aaKnown RBP7.23□□□□□ -1.25
UPF2-202ENST00000357604 AMBPP02760 352 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 HOXD3P31249 432 aaPredicted RBP7.23□□□□□ -1.25
UPF2-202ENST00000357604 MANBALQ9NQG1 85 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 AREGP15514 252 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 FAM78BQ5VT40 261 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 OR9G4Q8NGQ1 327 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 SUN5Q8TC36 379 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 SLC25A32Q9H2D1 315 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 IGKV3-7A0A075B6H7 116 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 TMEM78Q5T7P6 136 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 Q8N2B8 174 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 SPATA3Q8NHX4 192 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 TPSG1Q9NRR2 321 aa7.23□□□□□ -1.25
UPF2-202ENST00000357604 GOLT1BQ9Y3E0 138 aa7.22□□□□□ -1.25
UPF2-202ENST00000357604 PPP5D1E7EU14 171 aa7.22□□□□□ -1.25
UPF2-202ENST00000357604 ID3Q02535 119 aa7.22□□□□□ -1.25
UPF2-202ENST00000357604 C1orf194Q5T5A4 169 aa7.22□□□□□ -1.25
UPF2-202ENST00000357604 TNFSF18Q9UNG2 199 aa7.22□□□□□ -1.25
UPF2-202ENST00000357604 IZUMO4Q1ZYL8 232 aa7.22□□□□□ -1.25
UPF2-202ENST00000357604 Q6ZNX1 250 aa7.22□□□□□ -1.25
UPF2-202ENST00000357604 C11orf42Q8N5U0 333 aa7.22□□□□□ -1.25
UPF2-202ENST00000357604 SDHCQ99643 169 aaPredicted RBP7.22□□□□□ -1.25
UPF2-202ENST00000357604 IL6RP08887 468 aaPredicted RBP7.21□□□□□ -1.25
UPF2-202ENST00000357604 M6PRP20645 277 aa7.21□□□□□ -1.25
UPF2-202ENST00000357604 LINC00305Q7Z4B0 112 aa7.21□□□□□ -1.25
UPF2-202ENST00000357604 TAF15Q92804 592 aaKnown RBP eCLIP7.21□□□□□ -1.25
UPF2-202ENST00000357604 SPTBN5Q9NRC6 3674 aaKnown RBP7.21□□□□□ -1.25
UPF2-202ENST00000357604 SRRM4A7MD48 611 aaKnown RBP7.21□□□□□ -1.26
UPF2-202ENST00000357604 C8orf88P0DMB2 117 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 TREM1Q9NP99 234 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 ZNF207O43670 478 aaKnown RBP7.21□□□□□ -1.26
UPF2-202ENST00000357604 TMEM50AO95807 157 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 RPL29P47914 159 aaKnown RBP7.21□□□□□ -1.26
UPF2-202ENST00000357604 LEMD1Q68G75 181 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 FAM53AQ6NSI3 398 aaPredicted RBP7.21□□□□□ -1.26
UPF2-202ENST00000357604 PQLC2Q6ZP29 291 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 SFT2D1Q8WV19 159 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 AQP10Q96PS8 301 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 PSMG3Q9BT73 122 aaPredicted RBP7.21□□□□□ -1.26
UPF2-202ENST00000357604 RHPN1-AS1Q9BWJ2 59 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 OR51M1Q9H341 326 aa7.21□□□□□ -1.26
UPF2-202ENST00000357604 SOX21Q9Y651 276 aaPredicted RBP7.21□□□□□ -1.26
UPF2-202ENST00000357604 IGLV11-55A0A075B6I3 123 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms