RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 GFRA3O60609 400 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 PROP1O75360 226 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 SP1P08047 785 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 HSD52Q0P140 79 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 RAB31Q13636 194 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 ZNF766Q5HY98 468 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 RNFT1Q5M7Z0 435 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 UTF1Q5T230 341 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 Q8TCH9 128 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 TRIB1Q96RU8 372 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 TCF19Q9Y242 345 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 TPRP12270 2363 aaKnown RBP6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 HCFC1P51610 2035 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 HELTA6NFD8 242 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 TMEM164Q5U3C3 297 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 EAF1Q96JC9 268 aaPredicted RBP6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 SSBP3Q9BWW4 388 aaPredicted RBP6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 SPRR3Q9UBC9 169 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 ABCA1O95477 2261 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 FAM181BA6NEQ2 426 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 M0R2Z0 102 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 SLC25A17O43808 307 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 PRDX2P32119 198 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 TBR1Q16650 682 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 FAM201AQ5SY85 155 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 ZNF841Q6ZN19 808 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 OR4A5Q8NH83 315 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 RAB1CQ92928 201 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 OR2V2Q96R30 315 aa6.77□□□□□ -1.33
CDC42SE1-201ENST00000357235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 OR4C46A6NHA9 309 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 IQCF6A8MYZ5 107 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 K7EQM0 130 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 MPDU1O75352 247 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 ZNF134P52741 427 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 EIF4EBP1Q13541 118 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 TIGITQ495A1 244 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 EBLN2Q6P2I7 272 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 C11orf53Q8IXP5 236 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 CD177Q8N6Q3 437 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 DEFB108BQ8NET1 73 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 OR8B3Q8NGG8 313 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 OR2K2Q8NGT1 345 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 OR8B2Q96RD0 313 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 COMMD5Q9GZQ3 224 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 CXXC4Q9H2H0 198 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 KLF13Q9Y2Y9 288 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 A0A087X0K7 114 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 K7EP34 96 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 IGHV3-48P01763 117 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 HIST1H1AQ02539 215 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 MLANAQ16655 118 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 COX19Q49B96 90 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 ZNF788Q6ZQV5 615 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 C1orf122Q6ZSJ8 110 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 JKAMPQ9P055 326 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 SMG1Q96Q15 3661 aaKnown RBP6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 WISP2O76076 250 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 C5orf64Q2M2E5 130 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 ZNF479Q96JC4 524 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 SGK494Q96LW2 274 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 LINC00479Q96M42 142 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 NPFFR1Q9GZQ6 430 aa6.76□□□□□ -1.33
CDC42SE1-201ENST00000357235 GVINP1Q7Z2Y8 2422 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 BMPR1BO00238 502 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 ADH4P08319 380 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 USF1P22415 310 aaPredicted RBP6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 PPOXP50336 477 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 SEC11AP67812 179 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 ZNF718Q3SXZ3 478 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 CD300EQ496F6 205 aaPredicted RBP6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 HES3Q5TGS1 186 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 TMEM136Q6ZRR5 245 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 TMEM70Q9BUB7 260 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 GEMIN7Q9H840 131 aaKnown RBP6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 KMT2EQ8IZD2 1858 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 C9orf118A6NHY6 69 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 H3BUT2 72 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 ZNF207O43670 478 aaKnown RBP6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 APOA2P02652 100 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 GPR183P32249 361 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 VDAC2P45880 294 aaPredicted RBP6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 TNXAQ16473 311 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 TIMM8BQ9Y5J9 83 aaPredicted RBP6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 V9GYV3 84 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 LAMA5O15230 3695 aa6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 SPENQ96T58 3664 aaKnown RBP6.75□□□□□ -1.33
CDC42SE1-201ENST00000357235 PCSK5Q92824 1860 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 TEX48A0A1B0GUV7 120 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 hDV102S1A0JD36 115 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 HLA-DQA1P01909 254 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 CAMPP49913 170 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 TCTEX1D4Q5JR98 221 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 IBA57Q5T440 356 aaKnown RBP6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 MTURNQ8N3F0 131 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 OR5A1Q8NGJ0 315 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 RND1Q92730 232 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 NABP2Q9BQ15 211 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms