RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 PYYP10082 97 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 HIST1H1AQ02539 215 aaPredicted RBP13□□□□□ -0.33
TRAPPC11-202ENST00000357207 ORMDL3Q8N138 153 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 DMRTA2Q96SC8 542 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 DERL1Q9BUN8 251 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 EPDR1Q9UM22 224 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 LINC00312Q9Y6C7 94 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 ZNF407Q9C0G0 2248 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 MUC21A0A0G2JKD1 596 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 MUC21A0A140T8X8 626 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 GPR183P32249 361 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 MUC21Q5SSG8 566 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 AGMATQ9BSE5 352 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 ZNF256Q9Y2P7 627 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 GNG5P63218 68 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 ZNF664Q8N3J9 261 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 NEUROG1Q92886 237 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 DOCK9Q9BZ29 2069 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 DLEU1O43261 78 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 CA1P00915 261 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 LINC00614P0C842 121 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 GGNQ86UU5 652 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 A6NNC1 897 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 PF4V1P10720 104 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 FAM27E3Q08E93 113 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 FBLN7Q53RD9 439 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 SPCS1Q9Y6A9 102 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 TSC2P49815 1807 aa12.99□□□□□ -0.33
TRAPPC11-202ENST00000357207 ZSWIM8A7E2V4 1837 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 PRCDQ00LT1 54 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 ATP5LO75964 103 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 GZMBP10144 247 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 AREGP15514 252 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 NPPCP23582 126 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 FOXA2Q9Y261 457 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 PLXNA3P51805 1871 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 PSPNO60542 156 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 ARL6IP6Q8N6S5 226 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 ELOVL5Q9NYP7 299 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 PCNX1Q96RV3 2341 aa12.98□□□□□ -0.33
TRAPPC11-202ENST00000357207 SS18L1O75177 396 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 FAM53AQ6NSI3 398 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 RNF115Q9Y4L5 304 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 MGAMO43451 1857 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 IGHV3OR16-13A0A075B7E8 117 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 IGHV3-74A0A0B4J1X5 117 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 A0A0G2JRQ6 117 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 CCL3L1P16619 93 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 ACTL10Q5JWF8 245 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 Q6ZRM9 215 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 Q6ZS49 121 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 S4R3C0 116 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 C9JCJ5 164 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 GPX1P07203 203 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 DLX6P56179 175 aa12.97□□□□□ -0.33
TRAPPC11-202ENST00000357207 PINLYPA6NC86 204 aa12.96□□□□□ -0.33
TRAPPC11-202ENST00000357207 C19orf67A6NJJ6 358 aa12.96□□□□□ -0.33
TRAPPC11-202ENST00000357207 H3BUT2 72 aa12.96□□□□□ -0.33
TRAPPC11-202ENST00000357207 CD33P20138 364 aa12.96□□□□□ -0.33
TRAPPC11-202ENST00000357207 TSKUQ8WUA8 353 aa12.96□□□□□ -0.33
TRAPPC11-202ENST00000357207 DPM3Q9P2X0 92 aa12.96□□□□□ -0.33
TRAPPC11-202ENST00000357207 TCRBV4S1A1TA0A5B7 111 aa12.96□□□□□ -0.33
TRAPPC11-202ENST00000357207 EBLN2Q6P2I7 272 aa12.96□□□□□ -0.33
TRAPPC11-202ENST00000357207 C1orf147Q96MC9 270 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC11-202ENST00000357207 OTORQ9NRC9 128 aa12.96□□□□□ -0.33
TRAPPC11-202ENST00000357207 TRBV6-6A0A0A6YYG2 114 aa12.96□□□□□ -0.34
TRAPPC11-202ENST00000357207 LGALS3P17931 250 aaKnown RBP12.96□□□□□ -0.34
TRAPPC11-202ENST00000357207 C9orf106Q8NAJ2 232 aa12.96□□□□□ -0.34
TRAPPC11-202ENST00000357207 C5orf30Q96GV9 206 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 KIR2DL4Q99706 377 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 FOXC2Q99958 501 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 SEPSECSQ9HD40 501 aaKnown RBP12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 NPIPB6E9PJ23 425 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 C10orf91Q5T1B1 145 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 ASCL4Q6XD76 172 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 SYT8Q8NBV8 401 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 RAXQ9Y2V3 346 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 B9A039 149 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 SPATA31B1PQ5VZV4 182 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 FER1L6-AS1Q8NA97 138 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 LOC105371242A0A075B767 164 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 PRR7Q8TB68 274 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 C21orf62Q9NYP8 219 aa12.95□□□□□ -0.34
TRAPPC11-202ENST00000357207 ZNF883P0CG24 379 aa12.94□□□□□ -0.34
TRAPPC11-202ENST00000357207 LDLRAD2Q5SZI1 272 aa12.94□□□□□ -0.34
TRAPPC11-202ENST00000357207 ST20Q9HBF5 79 aa12.94□□□□□ -0.34
TRAPPC11-202ENST00000357207 A0A1B0GWB2 263 aa12.94□□□□□ -0.34
TRAPPC11-202ENST00000357207 ZFP36L1Q07352 338 aaKnown RBP12.94□□□□□ -0.34
TRAPPC11-202ENST00000357207 MED13LQ71F56 2210 aa12.94□□□□□ -0.34
TRAPPC11-202ENST00000357207 CACNA1BQ00975 2339 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 NUDT10Q8NFP7 164 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 NUDT11Q96G61 164 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 ANAPC10Q9UM13 185 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 ATP5L2Q7Z4Y8 100 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 MGST2Q99735 147 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 WDR90Q96KV7 1748 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 C17orf100A8MU93 164 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 CSRP2Q16527 193 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 COL6A6A6NMZ7 2263 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms