RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 TP53RKQ96S44 253 aa7.86□□□□□ -1.15
CAPN3-204ENST00000356316 MFFQ9GZY8 342 aa7.86□□□□□ -1.15
CAPN3-204ENST00000356316 EXTL2Q9UBQ6 330 aa7.86□□□□□ -1.15
CAPN3-204ENST00000356316 PUS1Q9Y606 427 aaKnown RBP eCLIP7.86□□□□□ -1.15
CAPN3-204ENST00000356316 A0A0B4J293 547 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 IGHV3-66A0A0C4DH42 116 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 B3GALNT1O75752 331 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 DFFBO76075 338 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 IGKV1-5P01602 117 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 OPRK1P41145 380 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 PPP5CP53041 499 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 TAS2R19P59542 299 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 LHFPL1Q86WI0 220 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 TMEM229BQ8NBD8 167 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 OR11H2Q8NH07 326 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 C11orf45Q8TAV5 145 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 PHLDA1Q8WV24 401 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-204ENST00000356316 ST8SIA2Q92186 375 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 METTL26Q96S19 204 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 MS4A6AQ9H2W1 248 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 MTFP1Q9UDX5 166 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 RABAC1Q9UI14 185 aa7.85□□□□□ -1.15
CAPN3-204ENST00000356316 PLECQ15149 4684 aaKnown RBP7.85□□□□□ -1.15
CAPN3-204ENST00000356316 TRAV30A0A087WSZ9 112 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 TEX13DA0A0J9YY54 714 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-204ENST00000356316 INS-IGF2F8WCM5 200 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 RGS5O15539 181 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 RAB3DO95716 219 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 CA1P00915 261 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-204ENST00000356316 APOHP02749 345 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-204ENST00000356316 EIF2B2P49770 351 aaKnown RBP7.84□□□□□ -1.15
CAPN3-204ENST00000356316 DEFB131AP59861 70 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 TMEM187Q14656 261 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 STEAP1BQ6NZ63 245 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 STHQ8IWL8 128 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 CENPSQ8N2Z9 138 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 GRAMD2BQ96HH9 432 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 VSIRQ9H7M9 311 aa7.84□□□□□ -1.15
CAPN3-204ENST00000356316 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-204ENST00000356316 C14orf166Q9Y224 244 aaKnown RBP7.84□□□□□ -1.15
CAPN3-204ENST00000356316 TRAV2A0A0B4J234 112 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 RPS10-NUDT3A0A1W2PQS6 291 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 GABARAPH6UMI1 98 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 CLN5O75503 358 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 GABARAPO95166 117 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 RNASE2P10153 161 aaKnown RBP7.83□□□□□ -1.16
CAPN3-204ENST00000356316 HTR2BP41595 481 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 RPL5P46777 297 aaKnown RBP7.83□□□□□ -1.16
CAPN3-204ENST00000356316 SPCS3P61009 180 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 MEF2DQ14814 521 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 RBMS2Q15434 407 aaKnown RBP7.83□□□□□ -1.16
CAPN3-204ENST00000356316 GPR107Q5VW38 600 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 LEMD1Q68G75 181 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 FAM219AQ8IW50 185 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 STXBP6Q8NFX7 210 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 OR13C8Q8NGS7 320 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 OR4X1Q8NH49 305 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 MARCH1Q8TCQ1 289 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 ZNF414Q96IQ9 312 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 ABHD1Q96SE0 405 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 HEYLQ9NQ87 328 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-204ENST00000356316 FBXL17Q9UF56 701 aa7.83□□□□□ -1.16
CAPN3-204ENST00000356316 A0A1B0GU03 582 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 DISC1C4P0D8 188 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 P0C879 139 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 UCP1P25874 307 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 MRPS10P82664 201 aaKnown RBP7.82□□□□□ -1.16
CAPN3-204ENST00000356316 DHODHQ02127 395 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 SSBP1Q04837 148 aaKnown RBP7.82□□□□□ -1.16
CAPN3-204ENST00000356316 CTF1Q16619 201 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 MLANAQ16655 118 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 LILRB2Q8N423 598 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 OR4D10Q8NGI6 311 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 Q8WTZ3 238 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 TMEM222Q9H0R3 208 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 CACFD1Q9UGQ2 172 aa7.82□□□□□ -1.16
CAPN3-204ENST00000356316 BIRC6Q9NR09 4857 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 CEBPZOSA8MTT3 80 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 CDS2O95674 445 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 CD74P04233 296 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 OR5AC1P0C628 307 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 CRYBB3P26998 211 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 P2RY1P47900 373 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 AP2S1P53680 142 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-204ENST00000356316 NANOS2P60321 138 aaKnown RBP7.81□□□□□ -1.16
CAPN3-204ENST00000356316 TMEM41BQ5BJD5 291 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 LGALS9CQ6DKI2 356 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 PVRIGQ6DKI7 326 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 ETFRF1Q6IPR1 90 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 MORN3Q6PF18 240 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-204ENST00000356316 NOXA1Q86UR1 476 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 OR52E5Q8NH55 327 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 C2CD4CQ8TF44 421 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 RBPMSQ93062 196 aaKnown RBP7.81□□□□□ -1.16
CAPN3-204ENST00000356316 NAA50Q9GZZ1 169 aaKnown RBP7.81□□□□□ -1.16
CAPN3-204ENST00000356316 C11orf68Q9H3H3 251 aaKnown RBP7.81□□□□□ -1.16
CAPN3-204ENST00000356316 KCNIP3Q9Y2W7 256 aa7.81□□□□□ -1.16
CAPN3-204ENST00000356316 HELTA6NFD8 242 aa7.8□□□□□ -1.16
CAPN3-204ENST00000356316 DEFB4AO15263 64 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms