RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MGST3O14880 152 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 TECTAO75443 2155 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 REG1AP05451 166 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 LEMD1Q68G75 181 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 INO80CQ6PI98 192 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-203ENST00000356147 DHRS13Q6UX07 377 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 MRPL52Q86TS9 123 aaKnown RBP8.25□□□□□ -1.09
PTPRA-203ENST00000356147 C9orf106Q8NAJ2 232 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 TNFRSF19Q9NS68 423 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 AMMECR1Q9Y4X0 333 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-203ENST00000356147 TRGV8A0A0C4DH27 118 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 IZUMO1RA6ND01 250 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 C8orf88P0DMB2 117 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 CA7P43166 264 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 TCTAP57738 103 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 RBX1P62877 108 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 RPL19P84098 196 aaKnown RBP8.25□□□□□ -1.09
PTPRA-203ENST00000356147 VAMP3Q15836 100 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 C19orf35Q6ZS72 473 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 Q6ZT83 130 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 SLC25A33Q9BSK2 321 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 SPRY4Q9C004 299 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 BET1LQ9NYM9 111 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 LY96Q9Y6Y9 160 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 ARL2-SNX15V9GYD0 113 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 LOC105371242A0A075B767 164 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 IGHV2OR16-5A0A0B4J2B6 119 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 IGHV1-18A0A0C4DH31 117 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 TEX50A0A1B0GTY4 177 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 SRRM5B3KS81 715 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 IGKV3-15P01624 115 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 CRYABP02511 175 aaKnown RBP8.25□□□□□ -1.09
PTPRA-203ENST00000356147 KIR2DL2P43627 348 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-203ENST00000356147 MPV17L2Q567V2 206 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 ZNF841Q6ZN19 808 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 Q71RC1 249 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-203ENST00000356147 KLHDC1Q8N7A1 406 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 FAM216BQ8N7L0 139 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 ITLN1Q8WWA0 313 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 CCL13Q99616 98 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 SLC25A2Q9BXI2 301 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 FOXA2Q9Y261 457 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-203ENST00000356147 COX11Q9Y6N1 276 aa8.25□□□□□ -1.09
PTPRA-203ENST00000356147 SNAI2O43623 268 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 S100A7P31151 101 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 SELENOVP59797 346 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 LOXL4Q96JB6 756 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 ALKBH7Q9BT30 221 aaPredicted RBP8.24□□□□□ -1.09
PTPRA-203ENST00000356147 ARRDC1-AS1Q9H2J1 176 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 CHODLQ9H9P2 273 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 MRPL36Q9P0J6 103 aaKnown RBP8.24□□□□□ -1.09
PTPRA-203ENST00000356147 CBY3A6NI87 242 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 UBE2G1P62253 170 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 TMEM164Q5U3C3 297 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 RUSC1-AS1Q66K80 236 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 ZNF738Q8NE65 137 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 OR4C5Q8NGB2 326 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 FAM167A-AS1Q96KT0 104 aa8.24□□□□□ -1.09
PTPRA-203ENST00000356147 LNP1A1A4G5 178 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 NKX6-3A6NJ46 265 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 FAM90A9PA6NNJ1 464 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 ZNF891A8MT65 544 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-203ENST00000356147 CSN3P07498 182 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 SAA1P0DJI8 122 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-203ENST00000356147 CCL11P51671 97 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 PRB3Q04118 309 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-203ENST00000356147 UBE2V1Q13404 147 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 LINC00322Q6ZN03 302 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-203ENST00000356147 NPIPB3Q92617 1050 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 URB1-AS1Q96HZ7 61 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 SLC25A10Q9UBX3 287 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-203ENST00000356147 TRAV9-2A0A087WT02 112 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 J3QW42 95 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 M0R1B8 84 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 MOSP00540 346 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 CT45A6P0DMU7 189 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 CT45A5P0DMU8 189 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 CT45A7P0DMV0 189 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 ORM2P19652 201 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 ACP1P24666 158 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 TAS2R45P59539 299 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 TBR1Q16650 682 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 OR4F17Q8NGA8 305 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 OR5B3Q8NH48 314 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 WASHC3Q9Y3C0 194 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 C2orf70A6NJV1 201 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 F2RL2O00254 374 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 ZZEF1O43149 2961 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 COX7A2P2O60397 106 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 RNASE2P10153 161 aaKnown RBP8.23□□□□□ -1.09
PTPRA-203ENST00000356147 FOXE3Q13461 319 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 DIAPH2-AS1Q14236 149 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 FBLN7Q53RD9 439 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 ZCCHC24Q8N2G6 241 aaKnown RBP8.23□□□□□ -1.09
PTPRA-203ENST00000356147 ORAOV1Q8WV07 137 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 C22orf15Q8WYQ4 148 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 PGLYRP4Q96LB8 373 aa8.23□□□□□ -1.09
PTPRA-203ENST00000356147 IGHV2-26A0A0B4J1V2 119 aa8.22□□□□□ -1.09
PTPRA-203ENST00000356147 OR4C46A6NHA9 309 aa8.22□□□□□ -1.09
PTPRA-203ENST00000356147 UPK2O00526 184 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms