RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 MOSP00540 346 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 LHFPL4Q7Z7J7 247 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 OR1L8Q8NGR8 309 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 BEX4Q9NWD9 120 aaPredicted RBP11.73□□□□□ -0.53
SREBF1-202ENST00000355815 METRNQ9UJH8 293 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 ACACBO00763 2458 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 APOHP02749 345 aaPredicted RBP11.73□□□□□ -0.53
SREBF1-202ENST00000355815 GOLT1AQ6ZVE7 132 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 MYOZ3Q8TDC0 251 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 MED12LQ86YW9 2145 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 C3orf79P0CE67 100 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 TIMP3P35625 211 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 LINC01551Q86U37 167 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 RPEQ96AT9 228 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 SNRNP40Q96DI7 357 aaKnown RBP11.73□□□□□ -0.53
SREBF1-202ENST00000355815 M0R3E3 92 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 NDUFB3O43676 98 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 TMEM50AO95807 157 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 CFPP27918 469 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 GPR183P32249 361 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 UBE2V1Q13404 147 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 PKIBQ9C010 78 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 TMEM160Q9NX00 188 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A26D6RGX4 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 SLC25A17O43808 307 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 RASL11BQ9BPW5 248 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A10PA6NDY2 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A18PA6NE21 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A16PA6NEW6 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A20PA6NIJ5 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A8PA6NJQ4 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A7PA6NKC0 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A22PA8MWA6 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A12PA8MX19 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A5PA8MXJ8 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A23PA8MXZ1 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 HYPMO75409 117 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 MGPP08493 103 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A15PP0C7V4 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A13PP0C7W8 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A14PP0C7W9 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A24PP0C7X0 464 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 Q6ZT83 130 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 TMEM56-RWDD3S4R434 201 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 DYSFO75923 2080 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A27PA6NNH2 459 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 LIPFP07098 398 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 NUDT10Q8NFP7 164 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 OR2K2Q8NGT1 345 aa11.72□□□□□ -0.53
SREBF1-202ENST00000355815 NHP2Q9NX24 153 aaKnown RBP11.72□□□□□ -0.53
SREBF1-202ENST00000355815 HBBP68871 147 aa11.71□□□□□ -0.53
SREBF1-202ENST00000355815 TMEM42Q69YG0 159 aa11.71□□□□□ -0.53
SREBF1-202ENST00000355815 WISP2O76076 250 aa11.71□□□□□ -0.54
SREBF1-202ENST00000355815 HTN1P15515 57 aa11.71□□□□□ -0.54
SREBF1-202ENST00000355815 HSPE1P61604 102 aaKnown RBP11.71□□□□□ -0.54
SREBF1-202ENST00000355815 FAM169BQ8N8A8 192 aa11.71□□□□□ -0.54
SREBF1-202ENST00000355815 PLXNB1O43157 2135 aa11.71□□□□□ -0.54
SREBF1-202ENST00000355815 CDX4O14627 284 aaPredicted RBP11.71□□□□□ -0.54
SREBF1-202ENST00000355815 SMIM13P0DJ93 91 aa11.71□□□□□ -0.54
SREBF1-202ENST00000355815 KIR2DL2P43627 348 aaPredicted RBP11.71□□□□□ -0.54
SREBF1-202ENST00000355815 C1orf174Q8IYL3 243 aa11.71□□□□□ -0.54
SREBF1-202ENST00000355815 PLSCR2Q9NRY7 297 aa11.71□□□□□ -0.54
SREBF1-202ENST00000355815 TRBV9A0A0B4J1U6 114 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 OR2T8A6NH00 312 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 PRSS2P07478 247 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 SAXO1Q8IYX7 474 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 OR1N2Q8NGR9 330 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 ZNF414Q96IQ9 312 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 ANKHD1Q8IWZ3 2542 aaKnown RBP11.7□□□□□ -0.54
SREBF1-202ENST00000355815 PRR33A8MZF0 331 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 ZNF138P52744 262 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 FXYD7P58549 80 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 GNG5P63218 68 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 TNFRSF19Q9NS68 423 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 PTPRQQ9UMZ3 2332 aa11.7□□□□□ -0.54
SREBF1-202ENST00000355815 MUC22E2RYF6 1773 aaPredicted RBP11.7□□□□□ -0.54
SREBF1-202ENST00000355815 RPL30P62888 115 aaKnown RBP11.69□□□□□ -0.54
SREBF1-202ENST00000355815 LRRC10Q5BKY1 277 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 TMEM242Q9NWH2 141 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 SOX21Q9Y651 276 aaPredicted RBP11.69□□□□□ -0.54
SREBF1-202ENST00000355815 REV3LO60673 3130 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 DLX1P56177 255 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 SRSF4Q08170 494 aaKnown RBP11.69□□□□□ -0.54
SREBF1-202ENST00000355815 TBR1Q16650 682 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 LYRM7Q5U5X0 104 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 STXBP6Q8NFX7 210 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 MBD3L1Q8WWY6 194 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 S4R3C0 116 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 FRYLO94915 3013 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 KIR2DS2P43631 304 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 SPANXN1Q5VSR9 72 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 RNF7Q9UBF6 113 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 USP34Q70CQ2 3546 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 IGKV3D-15A0A087WSY6 115 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 GAGE12BA1L429 117 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 TMEM189A5PLL7 270 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 APOMO95445 188 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 BMI1P35226 326 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms