RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 EFNA2O43921 213 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 SELLP14151 372 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 JKAMPQ9P055 326 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 TET1Q8NFU7 2136 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 GNLYP22749 145 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 TMEM42Q69YG0 159 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.97□□□□□ -0.65
SCN8A-202ENST00000355133 DUTP33316 252 aaKnown RBP10.97□□□□□ -0.65
SCN8A-202ENST00000355133 KLRD1Q13241 179 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 MLNRO43193 412 aa10.96□□□□□ -0.65
SCN8A-202ENST00000355133 TSPAN13O95857 204 aa10.96□□□□□ -0.65
SCN8A-202ENST00000355133 TTC32Q5I0X7 151 aa10.96□□□□□ -0.65
SCN8A-202ENST00000355133 Q6AWC8 147 aa10.96□□□□□ -0.65
SCN8A-202ENST00000355133 TCF23Q7RTU1 214 aa10.96□□□□□ -0.65
SCN8A-202ENST00000355133 PAQR4Q8N4S7 273 aaPredicted RBP10.96□□□□□ -0.65
SCN8A-202ENST00000355133 SOX21Q9Y651 276 aaPredicted RBP10.96□□□□□ -0.65
SCN8A-202ENST00000355133 IGKV1D-8A0A087WSZ0 117 aa10.96□□□□□ -0.65
SCN8A-202ENST00000355133 ZNF362Q5T0B9 420 aaPredicted RBP10.96□□□□□ -0.65
SCN8A-202ENST00000355133 VMO1Q7Z5L0 202 aa10.96□□□□□ -0.65
SCN8A-202ENST00000355133 GGNQ86UU5 652 aa10.96□□□□□ -0.65
SCN8A-202ENST00000355133 RNF126Q9BV68 326 aa10.96□□□□□ -0.65
SCN8A-202ENST00000355133 TRBV7-9A0A0J9YWB2 115 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 A0A1B0GW15 77 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 SAMD13Q5VXD3 122 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 CRIPAKQ8N1N5 446 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 ASCL2Q99929 193 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 ST20Q9HBF5 79 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 APOMO95445 188 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 C1QTNF9P0C862 333 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 EPDR1Q9UM22 224 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 RPL23P62829 140 aaKnown RBP10.96□□□□□ -0.66
SCN8A-202ENST00000355133 PRCDQ00LT1 54 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 ZDBF2Q9HCK1 2354 aa10.96□□□□□ -0.66
SCN8A-202ENST00000355133 TRGV4A0A0C4DH28 118 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 PAX8Q06710 450 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 LINC00469Q8N7U9 141 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 PATJQ8NI35 1801 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
SCN8A-202ENST00000355133 GTF3AQ92664 365 aaKnown RBP10.95□□□□□ -0.66
SCN8A-202ENST00000355133 CARHSP1Q9Y2V2 147 aaKnown RBP10.95□□□□□ -0.66
SCN8A-202ENST00000355133 TIMP3P35625 211 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 IGHV2-26A0A0B4J1V2 119 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 TRAV41A0A0B4J266 112 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 IGKV1-12A0A0C4DH73 117 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 IGKV1D-12P01611 117 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 CRYGSP22914 178 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 PSMG4Q5JS54 123 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 GTSCR1Q86UQ5 136 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 PSG8Q9UQ74 426 aa10.95□□□□□ -0.66
SCN8A-202ENST00000355133 ARID2Q68CP9 1835 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 ZNF236Q9UL36 1845 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 TRAV21A0A0B4J279 112 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 Q0VFX4 171 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 C10orf55Q5SWW7 151 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 PLSCR4Q9NRQ2 329 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 TRAV5A0A0B4J249 113 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 VCX2Q9H322 139 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 HEATR5BQ9P2D3 2071 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 DMRT1Q9Y5R6 373 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 MST1P26927 711 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 TMEM200BQ69YZ2 307 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 PGPEP1Q9NXJ5 209 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 BTCP35070 178 aa10.94□□□□□ -0.66
SCN8A-202ENST00000355133 SRSF6Q13247 344 aaKnown RBP10.94□□□□□ -0.66
SCN8A-202ENST00000355133 PSME4Q14997 1843 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 EVI2AP22794 236 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 EFNA4P52798 201 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 CCL20P78556 96 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 FAM89BQ8N5H3 189 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 NEUROG1Q92886 237 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 SCN8AQ9UQD0 1980 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 SAP30O75446 220 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 SIGLEC15Q6ZMC9 328 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 PGPEP1LA6NFU8 196 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 IFI27P40305 119 aaPredicted RBP10.93□□□□□ -0.66
SCN8A-202ENST00000355133 LINC00518Q8N0U6 118 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 WDR90Q96KV7 1748 aa10.93□□□□□ -0.66
SCN8A-202ENST00000355133 EFNB3Q15768 340 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 BRD3OSQ6XYD6 125 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 NABP1Q96AH0 204 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 PEF1Q9UBV8 284 aaKnown RBP10.92□□□□□ -0.66
SCN8A-202ENST00000355133 RBMY1BA6NDE4 496 aaKnown RBP10.92□□□□□ -0.66
SCN8A-202ENST00000355133 RBMY1EA6NEQ0 496 aaKnown RBP10.92□□□□□ -0.66
SCN8A-202ENST00000355133 RBMY1DP0C7P1 496 aaKnown RBP10.92□□□□□ -0.66
SCN8A-202ENST00000355133 RBMY1A1P0DJD3 496 aaKnown RBP10.92□□□□□ -0.66
SCN8A-202ENST00000355133 RBMY1CP0DJD4 496 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 ZNF415Q09FC8 603 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 GFI1Q99684 422 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 FBLN5Q9UBX5 448 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 ADMP35318 185 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 RPL15P61313 204 aaKnown RBP10.92□□□□□ -0.66
SCN8A-202ENST00000355133 SRSF3P84103 164 aaKnown RBP10.92□□□□□ -0.66
SCN8A-202ENST00000355133 VSIRQ9H7M9 311 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 WFDC1Q9HC57 220 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 J3QRE1 110 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 TYMSP04818 313 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 ZNF257Q9Y2Q1 563 aa10.92□□□□□ -0.66
SCN8A-202ENST00000355133 CACNA1EQ15878 2313 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 ALPK2Q86TB3 2170 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 A0A0G2JNJ9 132 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms