RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 C17orf100A8MU93 164 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 PAX8Q06710 450 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 SUMO4Q6EEV6 95 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 SLC50A1Q9BRV3 221 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 NBR2O15453 112 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 VWC2LB2RUY7 222 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 RREB1Q92766 1687 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 IGKCP01834 107 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 GATA2P23769 480 aaPredicted RBP4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 GNG5P63218 68 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 NPDC1Q9NQX5 325 aaPredicted RBP4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 ANAPC10Q9UM13 185 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 CFHR5Q9BXR6 569 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 UMODP07911 640 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 SLC25A38Q96DW6 304 aa4.86□□□□□ -1.63
SRGAP1-201ENST00000355086 PLCH1Q4KWH8 1693 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 SAP30O75446 220 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 PPIFP30405 207 aaKnown RBP4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 C12orf77C9JDV5 145 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 SPSB2Q99619 263 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 RNASE7Q9H1E1 156 aaKnown RBP4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 F2Z2F3 143 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 ERVK11-1P61568 191 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 LINC00312Q9Y6C7 94 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 CMC4P56277 68 aaPredicted RBP4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 TRAV9-1A0A075B6T8 112 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 C17orf98A8MV24 154 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 CEACAM8P31997 349 aaPredicted RBP4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 IGHV2OR16-5A0A0B4J2B6 119 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 CCL1P22362 96 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 RPL35AP18077 110 aaKnown RBP4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 TMEM8BA6NDV4 472 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 CDKN1AP38936 164 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 PVRIGQ6DKI7 326 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 FAM216BQ8N7L0 139 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 SIGLEC12Q96PQ1 595 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 RCHY1Q96PM5 261 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 PLXNB2O15031 1838 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 PRDM13Q9H4Q3 707 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 IGHV3-73A0A0B4J1V6 119 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 C15orf61A6NNL5 157 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 FAM181AQ8N9Y4 354 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 COX11Q9Y6N1 276 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 SRSF7Q16629 238 aaKnown RBP eCLIP4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 NRN1Q9NPD7 142 aa4.85□□□□□ -1.63
SRGAP1-201ENST00000355086 ERCC8Q13216 396 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 ZFAND6Q6FIF0 208 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 PLAC1Q9HBJ0 212 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 PPBPP02775 128 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 LOC102723996A0A087X1L8 192 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 TRBV5-3A0A0A0MS03 114 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 CD24P25063 80 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 H2BFSP57053 126 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 PILRAQ9UKJ1 303 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 RIPPLY3P57055 190 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 MGST2Q99735 147 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 TMEM14DPA8MWL7 114 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 RNF125Q96EQ8 232 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 IMMP1LQ96LU5 166 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 TMEM238C9JI98 176 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 SLC25A28Q96A46 364 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 FOCADQ5VW36 1801 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 MED13LQ71F56 2210 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 USP54Q70EL1 1684 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 TRAV40A0A0B4J280 105 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 THBDP07204 575 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 WNT2P09544 360 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 KLF12Q9Y4X4 402 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 GZMMP51124 257 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 CCL20P78556 96 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 DNAJC30Q96LL9 226 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 RGPD4Q7Z3J3 1758 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 ZNF625Q96I27 306 aaPredicted RBP4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 TM2D1Q9BX74 207 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 HEATR5AQ86XA9 2040 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 PSG7Q13046 419 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 LAGE3Q14657 143 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 PSG8Q9UQ74 426 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 ADMP35318 185 aa4.84□□□□□ -1.63
SRGAP1-201ENST00000355086 IFI27L1Q96BM0 104 aa4.84□□□□□ -1.64
SRGAP1-201ENST00000355086 OVOL2Q9BRP0 275 aa4.84□□□□□ -1.64
SRGAP1-201ENST00000355086 SIGLEC15Q6ZMC9 328 aa4.84□□□□□ -1.64
SRGAP1-201ENST00000355086 EPDR1Q9UM22 224 aa4.84□□□□□ -1.64
SRGAP1-201ENST00000355086 SAA2-SAA4A0A096LPE2 208 aa4.84□□□□□ -1.64
SRGAP1-201ENST00000355086 SAA2P0DJI9 122 aaPredicted RBP4.84□□□□□ -1.64
SRGAP1-201ENST00000355086 IQCF6A8MYZ5 107 aa4.84□□□□□ -1.64
SRGAP1-201ENST00000355086 NHLRC3Q5JS37 347 aa4.84□□□□□ -1.64
SRGAP1-201ENST00000355086 LINC00518Q8N0U6 118 aa4.84□□□□□ -1.64
SRGAP1-201ENST00000355086 LEPROTO15243 131 aa4.84□□□□□ -1.64
SRGAP1-201ENST00000355086 GAGE2BQ13066 116 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 FAM90A1Q86YD7 464 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 GGTLC1Q9BX51 225 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 CCL3L1P16619 93 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 ABHD17AQ96GS6 310 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 OVOL1O14753 267 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 TNFRSF6BO95407 300 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 AHDC1Q5TGY3 1603 aaPredicted RBP4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 TRGV1A0A0A0MS02 117 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 TRAV8-1A0A0A6YYK1 113 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms